当前解析结果
SmilChr06G000932| 统一新 Gene ID | SmilChr06G000932 |
|---|---|
| 名称 | SmilChr06G000932 |
| 描述 | uncharacterized SmilChr06G000932 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 8852873 - 8854024 / + |
| NCBI Gene ID | LOC130990453 |
|---|---|
| GeneID | 130990453 |
| locus_tag | - |
| NCBI Name | LOC130990453 |
| 原始查询 | SmilChr06G000932 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=30.2; qcov=0.475; evalue=2.75e-18; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990453 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057770670.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057770670.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057770670.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057770670.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057770670.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:8852898 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B68,C62 |
Chr6:8853002 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C65 |
Chr6:8853016 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C85 |
Chr6:8853037 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B25,B86,C31,C7,C70 |
Chr6:8853099 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:8853131 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr6:8853182 |
C |
T |
EMS_canonical_SNV | stop_gained | 18 | A11,A13,A16,A2,B102,B19,B20,B46,B50,B60,B66,B80,B94,C33,C4,C43,C52,C58 |
Chr6:8853218 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A23,B7,C84 |
Chr6:8853226 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C13,D11 |
Chr6:8853237 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C23 |
Chr6:8853252 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A18 |
Chr6:8853265 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。