当前解析结果
SmilChr06G000973| 统一新 Gene ID | SmilChr06G000973 |
|---|---|
| 名称 | SmilChr06G000973 |
| 描述 | F-box/LRR-repeat protein At4g29420-like |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 9434698 - 9437266 / + |
| NCBI Gene ID | LOC130988480 |
|---|---|
| GeneID | 130988480 |
| locus_tag | - |
| NCBI Name | LOC130988480 |
| 原始查询 | SmilChr06G000973 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | F-box/LRR-repeat protein At4g29420-like |
| 产物 | F-box/LRR-repeat protein At4g29420-like |
| Arabidopsis | AT4G29420 (AT4G29420)F-box/RNI-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:829063] identity=48.2; qcov=1.01; evalue=1.37e-144; confidence=high |
| Rice | Os01g0193500- identity=35.1; qcov=1.03; evalue=1.65e-66; confidence=medium |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988480 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057768326.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057768326.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057768326.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057768326.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057768326.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:9434838 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B83,C30,C59,C76,C86 |
Chr6:9434932 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A14,B57,C24,C42 |
Chr6:9434936 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
Chr6:9435121 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B51 |
Chr6:9435123 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B51 |
Chr6:9435171 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B88 |
Chr6:9435194 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C46,C6 |
Chr6:9435253 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B82 |
Chr6:9435790 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B83,C43,C5 |
Chr6:9436381 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B14,B56,C16,D2 |
Chr6:9436570 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B64,B90,B92 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。