Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G001083`

染色体: Chr06 坐标: 10814147-10820083 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G001083`
名称	SmilChr06G001083
描述	BEL1-like homeodomain protein 2
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	10814147 - 10820083 / `-`

ID 对照

NCBI Gene ID	`LOC130988604`
GeneID	`130988604`
locus_tag	`-`
NCBI Name	`LOC130988604`
原始查询	`SmilChr06G001083`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	BEL1-like homeodomain protein 2
产物	BEL1-like homeodomain protein 2
Arabidopsis	`AT4G36870` (BLH2) BEL1-like homeodomain 2 [Source:NCBI gene (formerly Entrezgene);Acc:829840] identity=74.2; qcov=0.427; evalue=8.84e-124; confidence=low
Rice	`Os03g0732100` - identity=65; qcov=0.482; evalue=7.6e-115; confidence=medium
GO	GO:0000978 (RNA polymerase II cis-regulatory region sequence-specific DNA binding); GO:0000981 (DNA-binding transcription factor activity, RNA polymerase II-specific); GO:0006357 (regulation of transcription by RNA polymerase II)
KEGG	-
Pfam	PF00046 (Homeodomain); PF05920 (Homeobox_KN); PF07526 (POX)
InterPro	-
eggNOG	-
NR	GeneID:130988604

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057768470.1`
2	Chromosome	染色体	0.00000	`XP_057768470.1`
3	Centromere	着丝粒	0.00000	`XP_057768470.1`
4	Chromatin	染色质	0.00000	`XP_057768470.1`
5	Telomere	端粒	0.00000	`XP_057768470.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:10814489`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B97
`Chr6:10814609`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B52
`Chr6:10814623`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B52,B70,B71,C62
`Chr6:10817836`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C6
`Chr6:10817881`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B114
`Chr6:10817920`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D3
`Chr6:10818565`	`C`	`CG`	1bp_insertion	frameshift_variant	3	B10,B24,C8
`Chr6:10818565`	`C`	`CG`	1bp_insertion	CDS_variant	3	B10,B24,C8
`Chr6:10818692`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D3
`Chr6:10818721`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr6:10818728`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr6:10818900`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B140

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057768470.1

600 aa

300

600

POX

Homeobox_KN

Homeodomain

PF07526 POX 257-384 aa PF05920 Homeobox_KN 452-491 aa PF00046 Homeodomain 459-491 aa

XP_057768471.1

600 aa

300

600

POX

Homeobox_KN

Homeodomain

PF07526 POX 257-384 aa PF05920 Homeobox_KN 452-491 aa PF00046 Homeodomain 459-491 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057768470.1`	Pfam	`PF07526`	POX	Domain	257	384	3.7e-43	148.0	Associated with HOX
`XP_057768470.1`	Pfam	`PF05920`	Homeobox_KN	Family	452	491	8.3e-19	67.9	Homeobox KN domain
`XP_057768470.1`	Pfam	`PF00046`	Homeodomain	Domain	459	491	4.8e-07	30.2	Homeodomain
`XP_057768471.1`	Pfam	`PF07526`	POX	Domain	257	384	4e-45	154.4	Associated with HOX
`XP_057768471.1`	Pfam	`PF05920`	Homeobox_KN	Family	452	491	8.4e-19	67.9	Homeobox KN domain
`XP_057768471.1`	Pfam	`PF00046`	Homeodomain	Domain	459	491	4.8e-07	30.2	Homeodomain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057912488.1
AAGAGAGCAACCTTTCCCTTGACGCAGTATGGACATAAGTGATACTTGAGCATCATATGATACGTGTGTATATATTATTCATAAGAAAAAGTCTTGGTAAATTAATTATTTAAATACTTAATTTATTGCTCTTTCTTCTTCTTTGTGAGAAGCACACCACCACTCTCACTGCACTAGAAATACCAACAAATAGAGAGAGATGACAGCGTAGAAGTAGTAGAGAGAGAGGAATTCAGAAGTTAAAAGAATAGTTTTTGTTT...

XM_057912487.1
AGTATGGACATAAGTGATACTTGAGCATCATATGATACGTGTGTATATATTATTCATAAGAAAAAGTCTTGGTAAATTAATTATTTAAATACTTAATTTATTGCTCTTTCTTCTTCTTTGTGAGAAGCACACCACCACTCTCACTGCACTAGAAATACCAACAAATAGAGAGAGATGACAGCGTAGAAGTAGTAGAGAGAGAGGAATTCAGAAGTTAAAAGAATAGTTTTTGTTTCTTTTACGAATCCCATAGAATTGAA...

CDS

2 records

下载 CDS FASTA

LOC130988604
ATGGGAATAGGGTCGCCGTTGCTCCATCCTCTTCAATTCTCCAACAACCAAAATTCCATGTCACAAGATTTTCATCAGAATATTTTCAGTTTCTCGAATGGAATCGATAGATCCGAACAGCAGCACCAGATTCGAAGCAATAAACAAAGGGCTCATGGCGTAGGGGCGGCGCCGTTAGTCGGTATGGAAGAAGATGGGCTTCCAAGCTATGAAGGCGGCGGTATATTTTCGGAGATGTTCAATTTCTCATCCGGCGCCAC...

Protein

2 records

下载 Protein FASTA

XP_057768470.1
MGIGSPLLHPLQFSNNQNSMSQDFHQNIFSFSNGIDRSEQQHQIRSNKQRAHGVGAAPLVGMEEDGLPSYEGGGIFSEMFNFSSGATATELLESQLAHPRAAEWFLHRQGAAAEGGLGNSKNGSVVNETGSYNHHEISSINADSAAAMQLFAMNPQQQRSPPPSPSPPPATNMLLQNPSNFPAGGAFGHFTWPANPNGAVEGQGQGLSLSLSSSAEELRLGLIFGQGGGTAPPPQYHRFDGGVSHNRHLGLGSSYTLSNS...

XP_057768471.1
MGIGSPLLHPLQFSNNQNSMSQDFHQNIFSFSNGIDRSEQQHQIRSNKQRAHGVGAAPLVGMEEDGLPSYEGGGIFSEMFNFSSGATATELLESQLAHPRAAEWFLHRQGAAAEGGLGNSKNGSVVNETGSYNHHEISSINADSAAAMQLFAMNPQQQRSPPPSPSPPPATNMLLQNPSNFPAGGAFGHFTWPANPNGAVEGQGQGLSLSLSSSAEELRLGLIFGQGGGTAPPPQYHRFDGGVSHNRHLGLGSSYTLSNS...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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