Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G001109`

染色体: Chr06 坐标: 11202444-11205057 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G001109`
名称	SmilChr06G001109
描述	cytosolic enolase 3-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	11202444 - 11205057 / `-`

ID 对照

NCBI Gene ID	`LOC130988629`
GeneID	`130988629`
locus_tag	`-`
NCBI Name	`LOC130988629`
原始查询	`SmilChr06G001109`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	cytosolic enolase 3-like
产物	cytosolic enolase 3-like
Arabidopsis	`AT2G29560` (ENOC) cytosolic enolase [Source:NCBI gene (formerly Entrezgene);Acc:817505] identity=64.1; qcov=0.716; evalue=1.13e-28; confidence=medium
Rice	`Os06g0136600` (OsEno5) - identity=53.9; qcov=0.716; evalue=5.66e-25; confidence=medium
GO	GO:0000015 (phosphopyruvate hydratase complex); GO:0000287 (magnesium ion binding); GO:0004634 (phosphopyruvate hydratase activity); GO:0006096 (glycolytic process)
KEGG	-
Pfam	PF00113 (Enolase_C); PF03952 (Enolase_N)
InterPro	-
eggNOG	-
NR	GeneID:130988629

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	0.80000	`XP_057768499.1`
2	Cytoplasm	细胞质	0.80000	`XP_057768504.1`
3	Nucleus	细胞核	0.80000	`XP_057768505.1`
4	Secreted	分泌到胞外	0.20000	`XP_057768499.1`
5	Peroxisome	过氧化物酶体	0.20000	`XP_057768504.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:11202637`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr6:11202649`	`G`	`A`	EMS_canonical_SNV	stop_gained	3	B104,B126,B28
`Chr6:11202649`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B104,B126,B28
`Chr6:11202656`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B105
`Chr6:11202675`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D1
`Chr6:11202677`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C34
`Chr6:11202686`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C34
`Chr6:11202911`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C48
`Chr6:11203426`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B101,B66,C79
`Chr6:11203439`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B129
`Chr6:11203441`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B101
`Chr6:11203449`	`T`	`TC`	1bp_insertion	frameshift_variant	26	A3,A4,A5,B109,B13,B134,B140,B15,B21,B26,B27,B30,B47,B56,B61,B66,B81,B83,B96,C12,C19,C26,C27,C40,C48,C63

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057768499.1

167 aa

167

Enolase_N

Enolase_C

PF03952 Enolase_N 2-77 aa PF00113 Enolase_C 86-139 aa

XP_057768500.1

167 aa

167

Enolase_N

Enolase_C

PF03952 Enolase_N 2-77 aa PF00113 Enolase_C 86-139 aa

XP_057768501.1

167 aa

167

Enolase_N

Enolase_C

PF03952 Enolase_N 2-77 aa PF00113 Enolase_C 86-139 aa

XP_057768502.1

167 aa

167

Enolase_N

Enolase_C

PF03952 Enolase_N 2-77 aa PF00113 Enolase_C 86-139 aa

XP_057768503.1

156 aa

156

Enolase_N

PF03952 Enolase_N 2-77 aa

XP_057768504.1

140 aa

140

Enolase_N

PF03952 Enolase_N 2-77 aa

XP_057768505.1

109 aa

109

Enolase_C

PF00113 Enolase_C 28-81 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057768499.1`	Pfam	`PF03952`	Enolase_N	Domain	2	77	2.2e-26	93.3	Enolase, N-terminal domain
`XP_057768499.1`	Pfam	`PF00113`	Enolase_C	Domain	86	139	9.9e-15	55.3	Enolase, C-terminal TIM barrel domain
`XP_057768500.1`	Pfam	`PF03952`	Enolase_N	Domain	2	77	2.2e-26	93.3	Enolase, N-terminal domain
`XP_057768500.1`	Pfam	`PF00113`	Enolase_C	Domain	86	139	9.9e-15	55.3	Enolase, C-terminal TIM barrel domain
`XP_057768501.1`	Pfam	`PF03952`	Enolase_N	Domain	2	77	2.2e-26	93.3	Enolase, N-terminal domain
`XP_057768501.1`	Pfam	`PF00113`	Enolase_C	Domain	86	139	9.9e-15	55.3	Enolase, C-terminal TIM barrel domain
`XP_057768502.1`	Pfam	`PF03952`	Enolase_N	Domain	2	77	2.2e-26	93.3	Enolase, N-terminal domain
`XP_057768502.1`	Pfam	`PF00113`	Enolase_C	Domain	86	139	9.9e-15	55.3	Enolase, C-terminal TIM barrel domain
`XP_057768503.1`	Pfam	`PF03952`	Enolase_N	Domain	2	77	2e-26	93.4	Enolase, N-terminal domain
`XP_057768504.1`	Pfam	`PF03952`	Enolase_N	Domain	2	77	1.7e-26	93.6	Enolase, N-terminal domain
`XP_057768505.1`	Pfam	`PF00113`	Enolase_C	Domain	28	81	4.3e-15	56.5	Enolase, C-terminal TIM barrel domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

8 records

下载 cDNA FASTA

XR_009090157.1
AAAAAAAAAGAACAGACGTTCCTTGTCTTCGTCGTTTTTCCCCAAATGCCAACGAAAGCCCTCGCGGAGAATTCCCCAAATCTACAGTGAGAAAGCTTCCATCTTCGACGAGAATCTGCTATCCAATCCAAACCTCTGCGATTCGGCGCTGTCGCCGATGAGAAGCCGCAATTTTGTGCTGCCGATTTTGGCGTTAAATGGTTTATTTTTACTTCTCTTCATCTCATTCTTGTTTCTTTCTCTGCATTTTATACCATTTT...

XM_057912519.1
AAAAAAAAAGAACAGACGTTCCTTGTCTTCGTCGTTTTTCCCCAAATGCCAACGAAAGCCCTCGCGGAGAATTCCCCAAATCTACAGTGAGAAAGCTTCCATCTTCGACGAGAATCTGCTATCCAATCCAAACCTCTGCGATTCGGCGCTGTCGCCGATGAGAAGCCGCAATTTTGTGCTGCCGATTTTGGCGTTAAATGACGAGAAGGAATTCGGTACGCTCACAGATCATTTCAACAAAAAGCATAGGAGCGAAATTG...

CDS

7 records

下载 CDS FASTA

LOC130988629
ATGTATCTTGGTAATGGTGTATGTAGTGCTGGCAAGAATGTTAATGAGAAAATATCTGAAGCTTTAATTGGTATGGATCCAACTCTCCAAGTTCAAATTGATCAAGCCATGATAGACTTGGACAAGACAAATAAAAAGGGTGAACTTGGGGCAAATGCAATTCTAGCAGTCTCAATGGCTGCTTGCAGAGCAGGGGTAGCTGAAAAAGAGGTCCCATTATACAAACACATTGCCGATTTAGCTAGCAAAACAAGTTATCA...

Protein

7 records

下载 Protein FASTA

XP_057768499.1
MYLGNGVCSAGKNVNEKISEALIGMDPTLQVQIDQAMIDLDKTNKKGELGANAILAVSMAACRAGVAEKEVPLYKHIADLASKTSYHLLVPAFTLTGGGNHAGNNLAIQEIMILRVGAKKFEKALQIGAETYHHLKVELRLGECIMRLEKQLAEERVARLEIELKTC

XP_057768500.1
MYLGNGVCSAGKNVNEKISEALIGMDPTLQVQIDQAMIDLDKTNKKGELGANAILAVSMAACRAGVAEKEVPLYKHIADLASKTSYHLLVPAFTLTGGGNHAGNNLAIQEIMILRVGAKKFEKALQIGAETYHHLKVELRLGECIMRLEKQLAEERVARLEIELKTC

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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