当前解析结果
SmilChr06G001140| 统一新 Gene ID | SmilChr06G001140 |
|---|---|
| 名称 | SmilChr06G001140 |
| 描述 | uncharacterized SmilChr06G001140 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 11446754 - 11448502 / + |
| NCBI Gene ID | LOC130990490 |
|---|---|
| GeneID | 130990490 |
| locus_tag | - |
| NCBI Name | LOC130990490 |
| 原始查询 | SmilChr06G001140 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0597300; species=rice; confidence=low |
| 产物 | hit=Os12g0597300; species=rice; confidence=low |
| Arabidopsis | AT1G06740 (MUG3)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669] identity=21.5; qcov=0.804; evalue=3.31e-08; confidence=weak |
| Rice | Os12g0597300- identity=25.2; qcov=0.893; evalue=1.81e-19; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990490 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057770701.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057770701.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057770701.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057770701.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057770701.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:11446800 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B80,C48,D9 |
Chr6:11446810 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
Chr6:11446816 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B109,B43,C55 |
Chr6:11446844 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B24,B78,C81 |
Chr6:11446857 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B20,C59 |
Chr6:11446862 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B101,B71,B75,B78,C19 |
Chr6:11446865 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B128,B24,B44,B62,C73 |
Chr6:11446869 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B119 |
Chr6:11446919 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B39,B90 |
Chr6:11446921 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B130,B27,C11,C16,C9 |
Chr6:11446927 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C41,D3 |
Chr6:11446940 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B57 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。