Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G001315`

染色体: Chr06 坐标: 13636719-13643719 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G001315`
名称	SmilChr06G001315
描述	uncharacterized SmilChr06G001315
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	13636719 - 13643719 / `-`

ID 对照

NCBI Gene ID	`LOC130988752`
GeneID	`130988752`
locus_tag	`-`
NCBI Name	`LOC130988752`
原始查询	`SmilChr06G001315`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824974]; symbol=AT3G58050; hit=AT3G58050; species=arabidopsis; confidence=high
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824974]; symbol=AT3G58050; hit=AT3G58050; species=arabidopsis; confidence=high
Arabidopsis	`AT3G58050` (AT3G58050) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:824974] identity=47.9; qcov=1.03; evalue=0; confidence=high
Rice	`Os10g0105400` - identity=67; qcov=0.304; evalue=2.74e-132; confidence=low
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:130988752

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057768682.1`
2	Cytosol	细胞质基质	0.80000	`XP_057768682.1`
3	Nucleus	细胞核	0.60000	`XP_057768683.1`
4	Chromosome	染色体	0.00000	`XP_057768682.1`
5	Centromere	着丝粒	0.00000	`XP_057768682.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:13637386`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A20,B51
`Chr6:13637432`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A6,C26,C47,C7
`Chr6:13637446`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B103,C13
`Chr6:13637616`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A16,B111,B3,C83
`Chr6:13637671`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C51
`Chr6:13637748`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C82
`Chr6:13637749`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C82
`Chr6:13638145`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr6:13638174`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B44
`Chr6:13638281`	`TTA`	`T`	2bp_deletion	frameshift_variant	36	A13,A18,A19,A23,A24,B106,B115,B120,B131,B134,B21,B3,B40,B41,B52,B55,B6,B64,B66,B79,B85,B89,B92,B94,C18,C2,C21,C25,C28,C3,C36,C37,C47,C67,C72,D8
`Chr6:13638285`	`GA`	`G`	1bp_deletion	frameshift_variant	37	A13,A18,A19,A23,A24,B106,B115,B117,B120,B131,B134,B21,B3,B40,B41,B52,B55,B6,B64,B66,B79,B85,B89,B92,B94,C18,C2,C21,C25,C28,C3,C36,C37,C47,C67,C72,D8
`Chr6:13638301`	`A`	`AG`	1bp_insertion	frameshift_variant	34	A13,A18,A19,A23,A24,B106,B115,B117,B131,B134,B21,B3,B40,B41,B52,B55,B6,B64,B66,B79,B85,B89,B92,B94,C18,C2,C21,C25,C28,C3,C36,C37,C67,D8

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057912699.1
ATATGTTAATAACAAAGTGAAGCACCAAAAATAAATAGTGTTATGATATTGATGGAACCCCTACCTGCACTCTTCGAATCTCCTATCCCCCAATCTCCCTCATAGAAACACACACACACACACTCAATCTCGCCCTATTGGAATTTCATCCTCCGCTCATCAATCTCATTGCATTTCTCAATCAAGATACGCTATTTGTGTACGAATACGCCGTTTGCATAGCTTCTCTACTGATACGGACTTCATTTGCTTATCGATCT...

XM_057912700.1
CTTGTGTATTGACAGTGAATGCCAAGATAATGTGATTGATCCGTCTCTCCATCCTTGGGGTGGATTAACTACTGCCAGGGAAGGGACGTTGACGCTTTTGGACTGTTACCTTCACTCAAAGTCTTTGAAGGGTCTCCAAAATTGCACGTGCAAGGGAAAGAGAACGCAAGTTGCTCTATCCTGATGCATGTGGAGGAGGTGGTCGGGGATGGATAAGCCAAGGAATGACAGGATATGGTAGAGGGCATGGAACAAGAGAA...

CDS

2 records

下载 CDS FASTA

LOC130988752
ATGCCCGGGATAGCGCAGAAGATTAATGTTTGCGGCGGTTCGAATGGGACTGTTTATCACAATTCATTGCTGGGAAATAGTGCCTTGCCGTATCACTCCTTTAATGGATCGTCGGTCTCCGCCAATGGCTTCTGGCCCAAGCATCGTGATGATATGAGCTACAATCAGCTGCAGAAGTTTTGGTGTGAGCTGTCAACACAAGCTCGGCAGAAACTTGTGAGGATTGACAAACAGACACTATTTGAGCATGCTCGTAAGAA...

LOC130988752
ATGACAGGATATGGTAGAGGGCATGGAACAAGAGAAACTTGTGCTCTTCATACTGCTAGATTATCAGTGGAGACATTGGTCGACTTTTGGTCAGCCCTTGGAGAGGAGACTCGGCAATCTCTTCTGAGGATGAAAGAAGAGGACTTTATTGAAAGGCTCATGTATAGGTTTGACAGCAAAAGGTTTTGTAGAGATTGTCGAAGAAATGTGATACGTGAATTTAAGGATCTGAAAGAGCTGAAGCGCATGAGAAAGGATCC...

Protein

2 records

下载 Protein FASTA

XP_057768682.1
MPGIAQKINVCGGSNGTVYHNSLLGNSALPYHSFNGSSVSANGFWPKHRDDMSYNQLQKFWCELSTQARQKLVRIDKQTLFEHARKNMYCSRCNGLLLEGFLQLVLYGKSLQQDATSGHYSGRTMKNQNCGNLCIDSECQDNVIDPSLHPWGGLTTAREGTLTLLDCYLHSKSLKGLQNVFDSARARERERKLLYPDACGGGGRGWISQGMTGYGRGHGTRETCALHTARLSVETLVDFWSALGEETRQSLLRMKEEDFI...

XP_057768683.1
MTGYGRGHGTRETCALHTARLSVETLVDFWSALGEETRQSLLRMKEEDFIERLMYRFDSKRFCRDCRRNVIREFKDLKELKRMRKDPRCTSWFCVADSVFQYEVSHDTVRADWHQTFLDACGTYHHFEWAIGTGEGKSDILDFKNVGLSLRVQVNGLDLSGLSACYITLRAWKMDGRCNELCVKAHALRGQQCVHCRLAVGNGYVTVIIGENIRRFFEHAEEAEEEEDDDSMDKDGNELDGECSRPQKHAKSPELAREFL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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