当前解析结果
SmilChr06G001364| 统一新 Gene ID | SmilChr06G001364 |
|---|---|
| 名称 | SmilChr06G001364 |
| 描述 | uncharacterized SmilChr06G001364 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 14222351 - 14223919 / + |
| NCBI Gene ID | LOC130988858 |
|---|---|
| GeneID | 130988858 |
| locus_tag | - |
| NCBI Name | LOC130988858 |
| 原始查询 | SmilChr06G001364 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | rho GTPase-activating gacO-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824962]; symbol=AT3G57930; hit=AT3G57930; species=arabidopsis; confidence=medium |
| 产物 | rho GTPase-activating gacO-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824962]; symbol=AT3G57930; hit=AT3G57930; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G57930 (AT3G57930)rho GTPase-activating gacO-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824962] identity=56.2; qcov=1.03; evalue=1.73e-30; confidence=medium |
| Rice | Os02g0717200- identity=44.6; qcov=0.993; evalue=4.27e-23; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130988858 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057768797.1 |
| 2 | Nucleolus | 核仁 | 0.20000 | XP_057768797.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057768797.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057768797.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057768797.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:14223441 |
TGA |
T |
2bp_deletion | frameshift_variant | 1 | C53 |
Chr6:14223441 |
TGA |
T |
2bp_deletion | CDS_variant | 1 | C53 |
Chr6:14223495 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A24,B30 |
Chr6:14223579 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A23,B122,B140,C84 |
Chr6:14223708 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A24,B30 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。