Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G001367`

染色体: Chr06 坐标: 14302244-14306546 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G001367`
名称	SmilChr06G001367
描述	FT-interacting protein 3
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	14302244 - 14306546 / `+`

ID 对照

NCBI Gene ID	`LOC130988861`
GeneID	`130988861`
locus_tag	`-`
NCBI Name	`LOC130988861`
原始查询	`SmilChr06G001367`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	FT-interacting protein 3
产物	FT-interacting protein 3
Arabidopsis	`AT3G57880` (AT3G57880) Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Source:NCBI gene (formerly Entrezgene);Acc:824957] identity=89.5; qcov=1; evalue=0; confidence=high
Rice	`Os05g0370600` (OsFTIP7) - identity=83.7; qcov=1; evalue=0; confidence=high
GO	-
KEGG	-
Pfam	PF00168 (C2); PF08372 (PRT_C)
InterPro	-
eggNOG	-
NR	GeneID:130988861

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	0.60000	`XP_057768801.1`
2	Vesicle	囊泡	0.60000	`XP_057768801.1`
3	Cell membrane	细胞膜	0.40000	`XP_057768801.1`
4	Endoplasmic reticulum membrane	内质网膜	0.40000	`XP_057768801.1`
5	Golgi apparatus	高尔基体	0.40000	`XP_057768801.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:14303946`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A23,B122,B140,C84
`Chr6:14304000`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B84,C59
`Chr6:14304261`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B14,B53,C6
`Chr6:14304324`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B128
`Chr6:14304480`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B14,B53,B64,C6,D5
`Chr6:14304504`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C27,D4
`Chr6:14305080`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B14,B64
`Chr6:14305128`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B14,B64,D5
`Chr6:14305152`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C2,C68
`Chr6:14305248`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B14,B53,B64,C6,D5
`Chr6:14305401`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B44
`Chr6:14305467`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B114

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057768801.1

772 aa

N

1

386

772

C2

C2

C2

PRT_C

C

PF00168 C2 40-144 aa PF00168 C2 201-307 aa PF00168 C2 363-472 aa PF08372 PRT_C 617-772 aa

XP_057768802.1

772 aa

N

1

386

772

C2

C2

C2

PRT_C

C

PF00168 C2 40-144 aa PF00168 C2 201-307 aa PF00168 C2 363-472 aa PF08372 PRT_C 617-772 aa

XP_057768803.1

772 aa

N

1

386

772

C2

C2

C2

PRT_C

C

PF00168 C2 40-144 aa PF00168 C2 201-307 aa PF00168 C2 363-472 aa PF08372 PRT_C 617-772 aa

XP_057768804.1

772 aa

N

1

386

772

C2

C2

C2

PRT_C

C

PF00168 C2 40-144 aa PF00168 C2 201-307 aa PF00168 C2 363-472 aa PF08372 PRT_C 617-772 aa

XP_057768805.1

772 aa

N

1

386

772

C2

C2

C2

PRT_C

C

PF00168 C2 40-144 aa PF00168 C2 201-307 aa PF00168 C2 363-472 aa PF08372 PRT_C 617-772 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057768801.1`	Pfam	`PF00168`	C2	Domain	40	144	2.7e-71	237.1	C2 domain
`XP_057768801.1`	Pfam	`PF00168`	C2	Domain	201	307	2.7e-71	237.1	C2 domain
`XP_057768801.1`	Pfam	`PF00168`	C2	Domain	363	472	2.7e-71	237.1	C2 domain
`XP_057768801.1`	Pfam	`PF08372`	PRT_C	Family	617	772	4.4e-83	277.4	Plant phosphoribosyltransferase C-terminal
`XP_057768802.1`	Pfam	`PF00168`	C2	Domain	40	144	2.7e-71	237.1	C2 domain
`XP_057768802.1`	Pfam	`PF00168`	C2	Domain	201	307	2.7e-71	237.1	C2 domain
`XP_057768802.1`	Pfam	`PF00168`	C2	Domain	363	472	2.7e-71	237.1	C2 domain
`XP_057768802.1`	Pfam	`PF08372`	PRT_C	Family	617	772	4.4e-83	277.4	Plant phosphoribosyltransferase C-terminal
`XP_057768803.1`	Pfam	`PF00168`	C2	Domain	40	144	2.7e-71	237.1	C2 domain
`XP_057768803.1`	Pfam	`PF00168`	C2	Domain	201	307	2.7e-71	237.1	C2 domain
`XP_057768803.1`	Pfam	`PF00168`	C2	Domain	363	472	2.7e-71	237.1	C2 domain
`XP_057768803.1`	Pfam	`PF08372`	PRT_C	Family	617	772	4.4e-83	277.4	Plant phosphoribosyltransferase C-terminal
`XP_057768804.1`	Pfam	`PF00168`	C2	Domain	40	144	2.7e-71	237.1	C2 domain
`XP_057768804.1`	Pfam	`PF00168`	C2	Domain	201	307	2.7e-71	237.1	C2 domain
`XP_057768804.1`	Pfam	`PF00168`	C2	Domain	363	472	2.7e-71	237.1	C2 domain
`XP_057768804.1`	Pfam	`PF08372`	PRT_C	Family	617	772	4.4e-83	277.4	Plant phosphoribosyltransferase C-terminal
`XP_057768805.1`	Pfam	`PF00168`	C2	Domain	40	144	2.7e-71	237.1	C2 domain
`XP_057768805.1`	Pfam	`PF00168`	C2	Domain	201	307	2.7e-71	237.1	C2 domain
`XP_057768805.1`	Pfam	`PF00168`	C2	Domain	363	472	2.7e-71	237.1	C2 domain
`XP_057768805.1`	Pfam	`PF08372`	PRT_C	Family	617	772	4.4e-83	277.4	Plant phosphoribosyltransferase C-terminal

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057912818.1
TACATACATTCCCACTCCTGAGCAATAAAAATAAACATAAAATAAATAAATTTCACACAGTACACACACAGTTGGGTTCGGTGGCATTGATAAAGCAGATTCATCAGATCTCGCCCAGTGTCCCCCACCACCCTCTTTATTTTTTTTTCCTCCCCTTTTTTAATTTGTGTGAAAGAGAGCAAGAAAATATCAAAAAAAAAAAAAAAAACCAAAAAAAACAAATTGCTCTTAGGAGCTCTCTGGTTTTGTGTAATTGCTTT...

XM_057912820.1
TATTTTTTTTTCCTCCCCTTTTTTAATTTGTGTGAAAGAGAGCAAGAAAATATCAAAAAAAAAAAAAAAAACCAAAAAAAACAAATTGCTCTTAGGAGCTCTCTGGTTTTGTGTAATTGCTTTTTCTTTTCTCCTTGATTCAAAAAGGCAACAAAGAACAAAACCCCTTCTCTCCTTTATTCCCTTGCTTTTTCTTTTTCTTTCTTCTTCTGCCCTCAGTTGTTTCAATCCATCTGCTGAAGAACCTTATCATGAACCTC...

CDS

5 records

下载 CDS FASTA

LOC130988861
ATGCAGAGGCCGCCGCAGGAAGATTTCTCGTTGAAGGAAACCAACCCCCACCTTGGTGGGGGGAAGGTTACCGGAGATAAGCTGACGAGCACCTATGACCTCGTTGAGCAGATGCAGTATCTCTATGTCCGTGTTGTGAAAGCAAAAGATTTACCCGGAAAGGATGTTTCTGGTAGTTGTGACCCATATGTTGAGGTTAGGCTCGGAAATTATAAGGGCACAACACGTCATTTTGAGAAAAAGTCAAACCCCGAATGGAA...

LOC130988861
ATGCAGAGGCCGCCGCAGGAAGATTTCTCGTTGAAGGAAACCAACCCCCACCTTGGTGGGGGGAAGGTTACCGGAGATAAGCTGACGAGCACCTATGACCTCGTTGAGCAGATGCAGTATCTCTATGTCCGTGTTGTGAAAGCAAAAGATTTACCCGGAAAGGATGTTTCTGGTAGTTGTGACCCATATGTTGAGGTTAGGCTCGGAAATTATAAGGGCACAACACGTCATTTTGAGAAAAAGTCAAACCCCGAATGGAA...

Protein

5 records

下载 Protein FASTA

XP_057768801.1
MQRPPQEDFSLKETNPHLGGGKVTGDKLTSTYDLVEQMQYLYVRVVKAKDLPGKDVSGSCDPYVEVRLGNYKGTTRHFEKKSNPEWNQVFAFSKERIQASVLEVSVKDKDVVKDDFIGRVIFDLNEIPKRVPPDSPLAPQWYRLEDRKSEKAKGELMLAVWMGTQADEAFPEAWHSDAATVSGADGLANIRSKVYLSPKLWYLRVNVIEAQDLQPSDKSRFPEVYVKAILGNQALRTRVSMSKSINPLWNEDLMFVAAEP...

XP_057768802.1
MQRPPQEDFSLKETNPHLGGGKVTGDKLTSTYDLVEQMQYLYVRVVKAKDLPGKDVSGSCDPYVEVRLGNYKGTTRHFEKKSNPEWNQVFAFSKERIQASVLEVSVKDKDVVKDDFIGRVIFDLNEIPKRVPPDSPLAPQWYRLEDRKSEKAKGELMLAVWMGTQADEAFPEAWHSDAATVSGADGLANIRSKVYLSPKLWYLRVNVIEAQDLQPSDKSRFPEVYVKAILGNQALRTRVSMSKSINPLWNEDLMFVAAEP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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