当前解析结果
SmilChr06G001464| 统一新 Gene ID | SmilChr06G001464 |
|---|---|
| 名称 | SmilChr06G001464 |
| 描述 | uncharacterized SmilChr06G001464 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 15498627 - 15498923 / - |
| NCBI Gene ID | LOC130990560 |
|---|---|
| GeneID | 130990560 |
| locus_tag | - |
| NCBI Name | LOC130990560 |
| 原始查询 | SmilChr06G001464 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | fission regulator-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824917]; symbol=AT3G57500; hit=AT3G57500; species=arabidopsis; confidence=medium |
| 产物 | fission regulator-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824917]; symbol=AT3G57500; hit=AT3G57500; species=arabidopsis; confidence=medium |
| Arabidopsis | AT3G57500 (AT3G57500)fission regulator-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824917] identity=62.5; qcov=0.735; evalue=6.29e-26; confidence=medium |
| Rice | Os03g0696150- identity=61.7; qcov=0.612; evalue=2.58e-09; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990560 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057770766.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057770766.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057770766.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057770766.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057770766.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:15498627 |
T |
TAA |
2bp_insertion | frameshift_variant | 10 | A19,B24,B40,B47,B59,C40,C46,C48,C8,D2 |
Chr6:15498628 |
CAG |
C |
2bp_deletion | frameshift_variant | 119 | A13,A15,A16,A18,A21,A4,A5,A8,A9,B1,B103,B106,B107,B108,B110,B111,B112,B114,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B127,B128,B129,B13,B130,B133,B137,B139,B14,B18,B19,B21,B22,B23,B28,B30,B31,B33,B34,B35,B38,B39,B45,B48,B49,B5,B50,B52,B53,B54,B55,B6,B60,B62,B63,B64,B68,B7,B75,B77,B79,B80,B82,B83,B85,B87,B9,B97,B98,C1,C11,C12,C13,C14,C15,C17,C20,C21,C23,C25,C27,C28,C30,C38,C39,C43,C49,C5,C50,C52,C54,C56,C58,C6,C62,C64,C65,C66,C67,C69,C76,C77,C78,C82,C84,D10,D11,D3,D4,D5,D8 |
Chr6:15498629 |
A |
AGT |
2bp_insertion | frameshift_variant | 67 | A13,A16,A4,A5,B1,B107,B108,B110,B112,B114,B119,B12,B125,B13,B139,B14,B19,B22,B30,B34,B38,B39,B45,B48,B50,B52,B53,B60,B62,B63,B64,B68,B7,B75,B77,B79,B82,B83,B88,B97,C1,C11,C12,C13,C15,C17,C20,C21,C23,C25,C28,C30,C39,C43,C49,C5,C50,C52,C56,C6,C69,C77,C82,D11,D3,D4,D5 |
Chr6:15498650 |
GT |
G |
1bp_deletion | frameshift_variant | 3 | B103,B117,C45 |
Chr6:15498650 |
GT |
G |
1bp_deletion | CDS_variant | 3 | B103,B117,C45 |
Chr6:15498660 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B26,B30,B72 |
Chr6:15498697 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B100 |
Chr6:15498783 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B44,C79 |
Chr6:15498863 |
G |
GT |
1bp_insertion | frameshift_variant | 2 | B14,C75 |
Chr6:15498863 |
G |
GT |
1bp_insertion | CDS_variant | 2 | B14,C75 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。