当前解析结果
SmilChr06G001650| 统一新 Gene ID | SmilChr06G001650 |
|---|---|
| 名称 | SmilChr06G001650 |
| 描述 | uncharacterized SmilChr06G001650 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 18705398 - 18709013 / + |
| NCBI Gene ID | LOC130990310 |
|---|---|
| GeneID | 130990310 |
| locus_tag | - |
| NCBI Name | LOC130990310 |
| 原始查询 | SmilChr06G001650 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | microbial collagenase [Source:NCBI gene (formerly Entrezgene);Acc:838386]; symbol=AT1G18060; hit=AT1G18060; species=arabidopsis; confidence=high |
| 产物 | microbial collagenase [Source:NCBI gene (formerly Entrezgene);Acc:838386]; symbol=AT1G18060; hit=AT1G18060; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G18060 (AT1G18060)microbial collagenase [Source:NCBI gene (formerly Entrezgene);Acc:838386] identity=68.9; qcov=0.827; evalue=1.1e-98; confidence=high |
| Rice | Os01g0120500- identity=58.3; qcov=1.02; evalue=8.05e-88; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990310 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057770511.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057770511.1 |
| 3 | Chloroplast stroma | 叶绿体基质 | 0.80000 | XP_057770511.1 |
| 4 | Chloroplast thylakoid membrane | 类囊体膜 | 0.20000 | XP_057770511.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057770511.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:18705507 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B28,D10 |
Chr6:18705567 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | C2,C24,C32,C68 |
Chr6:18705576 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B113,C34,C75 |
Chr6:18705645 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A10,B35,B80,B84 |
Chr6:18707449 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B113,C34,C75 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。