Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G001734`

染色体: Chr06 坐标: 19982534-19996002 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G001734`
名称	SmilChr06G001734
描述	inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	19982534 - 19996002 / `-`

ID 对照

NCBI Gene ID	`LOC130990385`
GeneID	`130990385`
locus_tag	`-`
NCBI Name	`LOC130990385`
原始查询	`SmilChr06G001734`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2-like
产物	inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2-like
Arabidopsis	`AT5G15070` (AT5G15070) Phosphoglycerate mutase-like family protein [Source:NCBI gene (formerly Entrezgene);Acc:831359] identity=83.8; qcov=0.992; evalue=0; confidence=high
Rice	`Os03g0689100` (OSJNBa0022C08.16) - identity=81.8; qcov=0.992; evalue=0; confidence=high
GO	GO:0000828 (inositol hexakisphosphate kinase activity); GO:0000829 (diphosphoinositol pentakisphosphate kinase activity); GO:0006020 (inositol metabolic process); GO:0032958 (inositol phosphate biosynthetic process); GO:0033857 (5-diphosphoinositol pentakisphosphate 1-kinase activity)
KEGG	smil00562 (Inositol phosphate metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil04070 (Phosphatidylinositol signaling system - Salvia miltiorrhiza (redroot sage))
Pfam	PF00328 (His_Phos_2); PF18086 (PPIP5K2_N)
InterPro	-
eggNOG	-
NR	GeneID:130990385

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057770607.1`
2	Cytosol	细胞质基质	1.00000	`XP_057770607.1`
3	Nucleus	细胞核	0.20000	`XP_057770607.1`
4	Cell projection	细胞突起	0.20000	`XP_057770607.1`
5	Chromosome	染色体	0.00000	`XP_057770607.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:19982839`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A20
`Chr6:19986820`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C21
`Chr6:19986985`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A10
`Chr6:19988169`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B128
`Chr6:19989273`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B1
`Chr6:19990049`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D10
`Chr6:19991179`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B28,B34,C85,D10,D11
`Chr6:19992930`	`AT`	`A`	1bp_deletion	frameshift_variant	1	B101
`Chr6:19992930`	`AT`	`A`	1bp_deletion	CDS_variant	1	B101
`Chr6:19992988`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B13,B61,B84,C47,C49
`Chr6:19994380`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B118,B22,B24,B48,D6
`Chr6:19994383`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B109,B24,B34,B65

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057770607.1

1066 aa

533

1066

PPIP5K2_N

His_Phos_2

PF18086 PPIP5K2_N 12-107 aa PF00328 His_Phos_2 367-941 aa

XP_057770608.1

1060 aa

530

1060

PPIP5K2_N

His_Phos_2

PF18086 PPIP5K2_N 12-101 aa PF00328 His_Phos_2 361-935 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057770607.1`	Pfam	`PF18086`	PPIP5K2_N	Domain	12	107	5.3e-35	120.2	Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain
`XP_057770607.1`	Pfam	`PF00328`	His_Phos_2	Family	367	941	1.3e-74	252.4	Histidine phosphatase superfamily (branch 2)
`XP_057770608.1`	Pfam	`PF18086`	PPIP5K2_N	Domain	12	101	3.9e-38	130.2	Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain
`XP_057770608.1`	Pfam	`PF00328`	His_Phos_2	Family	361	935	1.3e-74	252.5	Histidine phosphatase superfamily (branch 2)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057914624.1
CGGCCACCATAAATCCGCAAACCGTCTTTTTCCAACTCCCAAGCGCCTCCTATACCCTTTTTCGTATATCCCAGAATCCTCTCTCACTCTGTTTTTCAGTTGCCAAAAGTCTCTGCATTTTCTCTACCATTCTCCTCCGTTTCTCGTGATTCTCACTTGCCTGCGTAAAGAGACGTCGTTTGTCATCAGTTTTGGAGCTTGGAGTTGGAAATGGAGGGGGAAGAGGATGGTTTGAGGAAGAAGATTACTGTAGGAGTATG...

XM_057914625.1
GGCCACCATAAATCCGCAAACCGTCTTTTTCCAACTCCCAAGCGCCTCCTATACCCTTTTTCGTATATCCCAGAATCCTCTCTCACTCTGTTTTTCAGTTGCCAAAAGTCTCTGCATTTTCTCTACCATTCTCCTCCGTTTCTCGTGATTCTCACTTGCCTGCGTAAAGAGACGTCGTTTGTCATCAGTTTTGGAGCTTGGAGTTGGAAATGGAGGGGGAAGAGGATGGTTTGAGGAAGAAGATTACTGTAGGAGTATGT...

CDS

2 records

下载 CDS FASTA

LOC130990385
ATGGAGGGGGAAGAGGATGGTTTGAGGAAGAAGATTACTGTAGGAGTATGTGTAATGGAAAAGAAGGCCTCTTCAGCGCCGATGCTGGAGATTTTGGAGCGACTCGAGGCGTTTGGAGAGTTTGAGATTGTGTATTTTGGGGACAAGGTAATCCTTGAAGAACCTATCGAGAGGTGGCCGATATGCGAATGCCTGATTGCCTTCCATTCCACTGGCTATCCTCTGCAGAGGGCTGAAGCATATGCAGCGCTGAGAAAGCC...

LOC130990385
ATGGAGGGGGAAGAGGATGGTTTGAGGAAGAAGATTACTGTAGGAGTATGTGTAATGGAAAAGAAGGTGAAATGCGGCTCCGAGGCCTCTTCAGCGCCGATGCTGGAGATTTTGGAGCGACTCGAGGCGTTTGGAGAGTTTGAGATTGTGTATTTTGGGGACAAGGTAATCCTTGAAGAACCTATCGAGAGGTGGCCGATATGCGAATGCCTGATTGCCTTCCATTCCACTGGCTATCCTCTGCAGAGGGCTGAAGCATA...

Protein

2 records

下载 Protein FASTA

XP_057770607.1
MEGEEDGLRKKITVGVCVMEKKVKCGSEASSAPMLEILERLEAFGEFEIVYFGDKVILEEPIERWPICECLIAFHSTGYPLQRAEAYAALRKPFLVNELGQQRLLHDRRKVYEQLEMFGIPVPRYALVNRDYPNQDLDYFIEEEDFVEVHGNRFWKPFVEKPVDGDNHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPEVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVL...

XP_057770608.1
MEGEEDGLRKKITVGVCVMEKKASSAPMLEILERLEAFGEFEIVYFGDKVILEEPIERWPICECLIAFHSTGYPLQRAEAYAALRKPFLVNELGQQRLLHDRRKVYEQLEMFGIPVPRYALVNRDYPNQDLDYFIEEEDFVEVHGNRFWKPFVEKPVDGDNHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPEVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPTEK...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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