当前解析结果
SmilChr06G001747| 统一新 Gene ID | SmilChr06G001747 |
|---|---|
| 名称 | SmilChr06G001747 |
| 描述 | calcium sensing receptor, chloroplastic |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 20243088 - 20247943 / + |
| NCBI Gene ID | LOC130987395 |
|---|---|
| GeneID | 130987395 |
| locus_tag | - |
| NCBI Name | LOC130987395 |
| 原始查询 | SmilChr06G001747 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | calcium sensing receptor, chloroplastic |
| 产物 | calcium sensing receptor%2C chloroplastic |
| Arabidopsis | AT5G23060 (CaS)calcium sensing receptor [Source:NCBI gene (formerly Entrezgene);Acc:832370] identity=63.7; qcov=0.93; evalue=4.98e-170; confidence=high |
| Rice | Os02g0729400 (OsStr11)- identity=59; qcov=0.835; evalue=7.59e-131; confidence=high |
| GO | GO:0009704 (de-etiolation); GO:0071277 (cellular response to calcium ion); GO:0090333 (regulation of stomatal closure) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130987395 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057766898.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057766898.1 |
| 3 | Chloroplast thylakoid membrane | 类囊体膜 | 1.00000 | XP_057766898.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057766898.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057766898.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:20243311 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C34,D11 |
Chr6:20243317 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B101,B82,C50,C57,C82 |
Chr6:20243443 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B41,B44,B91,C51,C74 |
Chr6:20243453 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr6:20244249 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A14,C40,D10 |
Chr6:20244315 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr6:20245448 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C13 |
Chr6:20245487 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B136 |
Chr6:20247651 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C34 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。