当前解析结果
SmilChr06G001941| 统一新 Gene ID | SmilChr06G001941 |
|---|---|
| 名称 | SmilChr06G001941 |
| 描述 | glutathione S-transferase T3-like |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 23831066 - 23834693 / - |
| NCBI Gene ID | LOC130990661 |
|---|---|
| GeneID | 130990661 |
| locus_tag | - |
| NCBI Name | LOC130990661 |
| 原始查询 | SmilChr06G001941 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glutathione S-transferase T3-like |
| 产物 | glutathione S-transferase T3-like |
| Arabidopsis | AT5G41220 (GSTT3)glutathione S-transferase THETA 3 [Source:NCBI gene (formerly Entrezgene);Acc:834124] identity=25.1; qcov=0.722; evalue=9.67e-13; confidence=low |
| Rice | Os11g0303800- identity=25.8; qcov=0.9; evalue=3.72e-15; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990661 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057770869.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057770869.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057770869.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057770869.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057770869.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:23831074 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A14,B139,B42,D1,D6 |
Chr6:23831088 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | C82,D3 |
Chr6:23831088 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C82,D3 |
Chr6:23831095 |
G |
A |
EMS_canonical_SNV | stop_gained | 4 | B71,B72,C27,C82 |
Chr6:23831095 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B71,B72,C27,C82 |
Chr6:23831119 |
G |
A |
EMS_canonical_SNV | stop_gained | 26 | B11,B15,B16,B20,B3,B33,B38,B45,B47,B49,B50,B64,C2,C27,C50,C51,C56,C58,C60,C61,C7,C71,C81,C85,C86,D1 |
Chr6:23831122 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B105,B106,B89 |
Chr6:23831133 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr6:23831141 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B59 |
Chr6:23831146 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C19 |
Chr6:23831152 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B130 |
Chr6:23831156 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B120 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。