当前解析结果
SmilChr06G002027| 统一新 Gene ID | SmilChr06G002027 |
|---|---|
| 名称 | SmilChr06G002027 |
| 描述 | uncharacterized SmilChr06G002027 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 26305249 - 26307323 / - |
| NCBI Gene ID | LOC130990091 |
|---|---|
| GeneID | 130990091 |
| locus_tag | - |
| NCBI Name | LOC130990091 |
| 原始查询 | SmilChr06G002027 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=29.4; qcov=0.344; evalue=3.03e-25; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990091 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057770279.1 |
| 2 | Cytoplasmic granule | 细胞质颗粒 | 0.60000 | XP_057770279.1 |
| 3 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.60000 | XP_057770279.1 |
| 4 | P-body | P-body | 0.40000 | XP_057770279.1 |
| 5 | Stress granule | Stress granule | 0.20000 | XP_057770279.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:26305426 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C24 |
Chr6:26305436 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C25 |
Chr6:26305504 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C24 |
Chr6:26305514 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B12 |
Chr6:26305528 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B63 |
Chr6:26305621 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr6:26305657 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B137,D10 |
Chr6:26305658 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B58,C81 |
Chr6:26305820 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C21,C79 |
Chr6:26305821 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C4,C87 |
Chr6:26305825 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B97,C61,C68 |
Chr6:26305834 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A23,B125,B42,B49,B58 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。