当前解析结果
SmilChr06G002051| 统一新 Gene ID | SmilChr06G002051 |
|---|---|
| 名称 | SmilChr06G002051 |
| 描述 | uncharacterized SmilChr06G002051 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 26929816 - 26931031 / - |
| NCBI Gene ID | LOC130990698 |
|---|---|
| GeneID | 130990698 |
| locus_tag | - |
| NCBI Name | LOC130990698 |
| 原始查询 | SmilChr06G002051 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | transcription activator [Source:NCBI gene (formerly Entrezgene);Acc:831959]; symbol=PIR121; hit=AT5G18410; species=arabidopsis; confidence=weak |
| 产物 | transcription activator [Source:NCBI gene (formerly Entrezgene);Acc:831959]; symbol=PIR121; hit=AT5G18410; species=arabidopsis; confidence=weak |
| Arabidopsis | AT5G18410 (PIR121)transcription activator [Source:NCBI gene (formerly Entrezgene);Acc:831959] identity=80.8; qcov=0.228; evalue=3.04e-08; confidence=weak |
| Rice | Os03g0143800 (LPL2)- identity=80.8; qcov=0.228; evalue=8.05e-08; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990698 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.60000 | XP_057770909.1 |
| 2 | Cytoplasm | 细胞质 | 0.60000 | XP_057770909.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057770909.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057770909.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057770909.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:26929846 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C44 |
Chr6:26929898 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A9 |
Chr6:26929913 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B119,B33,C31,C83 |
Chr6:26929931 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B55 |
Chr6:26929962 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C64,C66 |
Chr6:26930590 |
T |
TG |
1bp_insertion | frameshift_variant | 18 | A21,B13,B130,B15,B20,B24,B34,B38,B39,B49,B6,B76,B94,C1,C13,C56,C67,C83 |
Chr6:26930591 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B12,B137,B55,C2 |
Chr6:26930595 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B74,C56 |
Chr6:26930615 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C21,C29 |
Chr6:26930618 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B13,B5 |
Chr6:26930619 |
G |
A |
EMS_canonical_SNV | stop_gained | 2 | C21,C29 |
Chr6:26930619 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C21,C29 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。