当前解析结果
SmilChr06G002320| 统一新 Gene ID | SmilChr06G002320 |
|---|---|
| 名称 | SmilChr06G002320 |
| 描述 | uncharacterized SmilChr06G002320 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 33465748 - 33466527 / - |
| NCBI Gene ID | LOC130990783 |
|---|---|
| GeneID | 130990783 |
| locus_tag | - |
| NCBI Name | LOC130990783 |
| 原始查询 | SmilChr06G002320 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439]; symbol=AT4G17250; hit=AT4G17250; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439]; symbol=AT4G17250; hit=AT4G17250; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G17250 (AT4G17250)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:827439] identity=42.5; qcov=1.03; evalue=1.03e-57; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990783 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.80000 | XP_057770999.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.60000 | XP_057770999.1 |
| 3 | Vacuole | 液泡 | 0.20000 | XP_057770999.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057770999.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057770999.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:33465752 |
AC |
A |
1bp_deletion | frameshift_variant | 2 | A22,B121 |
Chr6:33465752 |
AC |
A |
1bp_deletion | CDS_variant | 2 | A22,B121 |
Chr6:33465779 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C57 |
Chr6:33465813 |
GTT |
G |
2bp_deletion | frameshift_variant | 1 | C57 |
Chr6:33465813 |
GTT |
G |
2bp_deletion | CDS_variant | 1 | C57 |
Chr6:33465816 |
C |
CGG |
2bp_insertion | frameshift_variant | 1 | C57 |
Chr6:33465816 |
C |
CGG |
2bp_insertion | CDS_variant | 1 | C57 |
Chr6:33465826 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D4 |
Chr6:33465923 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B22 |
Chr6:33465987 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A7,B44 |
Chr6:33466003 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B102 |
Chr6:33466060 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A7,B30,B44,C56 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。