Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G002585`

染色体: Chr06 坐标: 37059666-37063213 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G002585`
名称	SmilChr06G002585
描述	anthranilate phosphoribosyltransferase, chloroplastic-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	37059666 - 37063213 / `-`

ID 对照

NCBI Gene ID	`LOC130989409`
GeneID	`130989409`
locus_tag	`-`
NCBI Name	`LOC130989409`
原始查询	`SmilChr06G002585`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	anthranilate phosphoribosyltransferase, chloroplastic-like
产物	anthranilate phosphoribosyltransferase%2C chloroplastic-like
Arabidopsis	`AT5G17990` (TRP1) tryptophan biosynthesis 1 [Source:NCBI gene (formerly Entrezgene);Acc:831666] identity=75.3; qcov=0.771; evalue=6.95e-156; confidence=high
Rice	`Os03g0126000` - identity=67.6; qcov=0.774; evalue=1.59e-131; confidence=high
GO	GO:0000162 (L-tryptophan biosynthetic process); GO:0004048 (anthranilate phosphoribosyltransferase activity); GO:0005829 (cytosol)
KEGG	smil00400 (Phenylalanine, tyrosine and tryptophan biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01230 (Biosynthesis of amino acids - Salvia miltiorrhiza (redroot sage))
Pfam	PF00591 (Glycos_transf_3); PF02885 (Glycos_trans_3N)
InterPro	-
eggNOG	-
NR	GeneID:130989409

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057769384.1`
2	Chloroplast stroma	叶绿体基质	1.00000	`XP_057769384.1`
3	Nucleus	细胞核	0.00000	`XP_057769384.1`
4	Chromosome	染色体	0.00000	`XP_057769384.1`
5	Centromere	着丝粒	0.00000	`XP_057769384.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:37060098`	`G`	`GT`	1bp_insertion	frameshift_variant	42	A11,A13,A18,A22,A8,A9,B10,B104,B108,B109,B111,B112,B115,B117,B121,B122,B123,B129,B132,B137,B18,B20,B21,B31,B5,B54,B59,B6,B77,B85,B88,B9,B90,B92,B93,C1,C34,C41,C50,C51,C67,C9
`Chr6:37060161`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C52
`Chr6:37060240`	`GT`	`G`	1bp_deletion	frameshift_variant	168	A1,A10,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A3,A4,A5,A7,A8,B1,B10,B100,B101,B103,B104,B105,B107,B11,B110,B112,B119,B12,B122,B125,B127,B128,B13,B130,B131,B133,B134,B135,B136,B137,B138,B139,B14,B16,B17,B18,B19,B22,B23,B24,B26,B27,B30,B31,B33,B34,B38,B39,B4,B40,B41,B47,B48,B49,B50,B51,B52,B53,B55,B56,B57,B58,B60,B62,B63,B64,B65,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B81,B82,B83,B85,B86,B87,B88,B89,B91,B93,B94,B95,B96,B97,C11,C12,C14,C15,C16,C17,C19,C2,C20,C21,C23,C24,C25,C28,C29,C3,C30,C32,C33,C36,C37,C38,C40,C49,C5,C52,C53,C54,C55,C57,C58,C59,C6,C60,C65,C68,C69,C7,C71,C72,C74,C75,C76,C77,C78,C79,C81,C82,C83,C84,C85,C86,C9,D10,D11,D2,D3,D4,D5,D7,D8
`Chr6:37060992`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B120,B139,C4
`Chr6:37062884`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A10,A14,A20,A3
`Chr6:37062950`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B91

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057769384.1

398 aa

199

398

Glycos_trans_3N

Glycos_transf_3

PF02885 Glycos_trans_3N 60-118 aa PF00591 Glycos_transf_3 127-377 aa

XP_057769385.1

374 aa

187

374

Glycos_trans_3N

Glycos_transf_3

PF02885 Glycos_trans_3N 60-118 aa PF00591 Glycos_transf_3 127-344 aa

XP_057769386.1

367 aa

184

367

Glycos_trans_3N

Glycos_transf_3

PF02885 Glycos_trans_3N 60-118 aa PF00591 Glycos_transf_3 127-343 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057769384.1`	Pfam	`PF02885`	Glycos_trans_3N	Domain	60	118	2.5e-15	56.7	Glycosyl transferase family, helical bundle domain
`XP_057769384.1`	Pfam	`PF00591`	Glycos_transf_3	Domain	127	377	4.1e-93	312.4	Glycosyl transferase family, a/b domain
`XP_057769385.1`	Pfam	`PF02885`	Glycos_trans_3N	Domain	60	118	2.3e-15	56.8	Glycosyl transferase family, helical bundle domain
`XP_057769385.1`	Pfam	`PF00591`	Glycos_transf_3	Domain	127	344	8.6e-84	281.9	Glycosyl transferase family, a/b domain
`XP_057769386.1`	Pfam	`PF02885`	Glycos_trans_3N	Domain	60	118	2.3e-15	56.8	Glycosyl transferase family, helical bundle domain
`XP_057769386.1`	Pfam	`PF00591`	Glycos_transf_3	Domain	127	343	6.5e-84	282.3	Glycosyl transferase family, a/b domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057913401.1
CTTTTGGAAAATTCATTCATTCTACATAAATGTCGCTTTACCTAAACATTTTGATGTGTCCTATAACTGTCTGCAGCGGTCACCAAACAATGCAGCTCTCGCATTTAAGACAGCAAGTATATATAGTAAGTATGATATATACCTTATGTTTCTATGCCAAATCTCACACTGAAATGCAGCAATGGCTGTGTTAAAGAAAAATCCACTTTTTTCTTCTCTATTTCATCTCACATCCAACCACGCTTCTGAAATTCCGAGGT...

XM_057913402.1
ATTCTTCACTTTTGGAAAATTCATTCATTCTACATAAATGTCGCTTTACCTAAACATTTTGATGTGTCCTATAACTGTCTGCAGCGGTCACCAAACAATGCAGCTCTCGCATTTAAGACAGCAAGTATATATAGTAAGTATGATATATACCTTATGTTTCTATGCCAAATCTCACACTGAAATGCAGCAATGGCTGTGTTAAAGAAAAATCCACTTTTTTCTTCTCTATTTCATCTCACATCCAACCACGCTTCTGAAAT...

CDS

3 records

下载 CDS FASTA

LOC130989409
ATGGCTGTGTTAAAGAAAAATCCACTTTTTTCTTCTCTATTTCATCTCACATCCAACCACGCTTCTGAAATTCCGAGGTTTGCTGTCGTGAATCGTCGCGAGTTGTTGATGAAATCATATCCTAGAATTCAACTTCACCGCCGCCCCCTTCTTCGCCTGCCCATTTCTTGTCCAGGAGAGTTGATGGAGTGTTTGGTGAATAAGGAGGATTTGAGTGAAGAGGAAGCAGAGGGAGCACTTGATTTCTTGCTCACCAATGG...

Protein

3 records

下载 Protein FASTA

XP_057769384.1
MAVLKKNPLFSSLFHLTSNHASEIPRFAVVNRRELLMKSYPRIQLHRRPLLRLPISCPGELMECLVNKEDLSEEEAEGALDFLLTNGNDALISAFLVLLRAKGETFEEVVGMARAMIKCCKKVEGLENAVDIVGTGSDGANTVNISTGAAILAAACGAKVAKQGHRSSSSACGSADVLEALGVAIDMEPKGVKTCVEEVGIGFMMSPNHHPAMKTFAPVRRKLGVKTVFNIMGPMLNPARVPFSVVGVYKADMVSKMAKA...

XP_057769385.1
MAVLKKNPLFSSLFHLTSNHASEIPRFAVVNRRELLMKSYPRIQLHRRPLLRLPISCPGELMECLVNKEDLSEEEAEGALDFLLTNGNDALISAFLVLLRAKGETFEEVVGMARAMIKCCKKVEGLENAVDIVGTGSDGANTVNISTGAAILAAACGAKVAKQGHRSSSSACGSADVLEALGVAIDMEPKGVKTCVEEVGIGFMMSPNHHPAMKTFAPVRRKLGVKTVFNIMGPMLNPARVPFSVVGVYKADMVSKMAKA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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