当前解析结果
SmilChr06G002621| 统一新 Gene ID | SmilChr06G002621 |
|---|---|
| 名称 | SmilChr06G002621 |
| 描述 | uncharacterized SmilChr06G002621 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 37724743 - 37726185 / - |
| NCBI Gene ID | LOC130989419 |
|---|---|
| GeneID | 130989419 |
| locus_tag | - |
| NCBI Name | LOC130989419 |
| 原始查询 | SmilChr06G002621 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | NHL domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:814669]; symbol=AT2G01410; hit=AT2G01410; species=arabidopsis; confidence=high |
| 产物 | NHL domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:814669]; symbol=AT2G01410; hit=AT2G01410; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G01410 (AT2G01410)NHL domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:814669] identity=51.7; qcov=1.04; evalue=1.16e-118; confidence=high |
| Rice | Os01g0606133- identity=36; qcov=0.945; evalue=1.97e-35; confidence=medium |
| GO | GO:0005783 (endoplasmic reticulum) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130989419 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Vacuole | 液泡 | 0.60000 | XP_057769403.1 |
| 2 | Cell wall | 细胞壁 | 0.40000 | XP_057769403.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057769403.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057769403.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057769403.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:37725087 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B66 |
Chr6:37725143 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C51,C52 |
Chr6:37725226 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B83,C2,C32,C59 |
Chr6:37725460 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B34 |
Chr6:37725488 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B133,B63,B83 |
Chr6:37725608 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A23 |
Chr6:37725614 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B97,C72,C79 |
Chr6:37725842 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B85,B94 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。