当前解析结果
SmilChr06G002631| 统一新 Gene ID | SmilChr06G002631 |
|---|---|
| 名称 | SmilChr06G002631 |
| 描述 | uncharacterized SmilChr06G002631 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 37872958 - 37874121 / + |
| NCBI Gene ID | LOC130990875 |
|---|---|
| GeneID | 130990875 |
| locus_tag | - |
| NCBI Name | LOC130990875 |
| 原始查询 | SmilChr06G002631 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=30.2; qcov=0.47; evalue=9.96e-24; confidence=low |
| Rice | Os12g0156200- identity=22.3; qcov=0.556; evalue=6.6e-08; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990875 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057771085.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057771085.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.40000 | XP_057771085.1 |
| 4 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.40000 | XP_057771085.1 |
| 5 | P-body | P-body | 0.40000 | XP_057771085.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:37873328 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B87 |
Chr6:37873384 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B108,B54 |
Chr6:37873547 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C77 |
Chr6:37873578 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr6:37873604 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B107 |
Chr6:37873605 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B118 |
Chr6:37873624 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B42,B62,C38,C63 |
Chr6:37873625 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C45 |
Chr6:37873654 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B140,C24,C25 |
Chr6:37873741 |
CT |
C |
1bp_deletion | frameshift_variant | 1 | A7 |
Chr6:37873741 |
CT |
C |
1bp_deletion | CDS_variant | 1 | A7 |
Chr6:37873784 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C8 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。