当前解析结果
SmilChr06G002736| 统一新 Gene ID | SmilChr06G002736 |
|---|---|
| 名称 | SmilChr06G002736 |
| 描述 | CBL-interacting serine/threonine-protein kinase 6-like |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 39620245 - 39620800 / - |
| NCBI Gene ID | LOC130990901 |
|---|---|
| GeneID | 130990901 |
| locus_tag | - |
| NCBI Name | LOC130990901 |
| 原始查询 | SmilChr06G002736 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | CBL-interacting serine/threonine-protein kinase 6-like |
| 产物 | CBL-interacting serine/threonine-protein kinase 6-like |
| Arabidopsis | AT4G30960 (SIP3)SOS3-interacting protein 3 [Source:NCBI gene (formerly Entrezgene);Acc:829221] identity=46.5; qcov=1.14; evalue=1.09e-38; confidence=medium |
| Rice | Os01g0206700 (OsCIPK05)- identity=38.1; qcov=1.17; evalue=1.85e-34; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990901 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057771112.1 |
| 2 | Cytosol | 细胞质基质 | 1.00000 | XP_057771112.1 |
| 3 | Cytoplasm | 细胞质 | 0.80000 | XP_057771112.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057771112.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057771112.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:39620301 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B97,C14,C20,C37 |
Chr6:39620308 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B122 |
Chr6:39620310 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A20,B124,B51,C40 |
Chr6:39620341 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B72,B85,B94 |
Chr6:39620367 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B23,B58,C5 |
Chr6:39620383 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C34,C62 |
Chr6:39620385 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B12,B37,C21,C44 |
Chr6:39620392 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B18,B24,B75,C16,C51 |
Chr6:39620405 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B3,B70,C62 |
Chr6:39620418 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A4,B48,C57,C82 |
Chr6:39620437 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C17 |
Chr6:39620454 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B104,B138 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。