当前解析结果
SmilChr06G002846| 统一新 Gene ID | SmilChr06G002846 |
|---|---|
| 名称 | SmilChr06G002846 |
| 描述 | uncharacterized protein At5g39570-like |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 41228988 - 41231369 / - |
| NCBI Gene ID | LOC130989591 |
|---|---|
| GeneID | 130989591 |
| locus_tag | - |
| NCBI Name | LOC130989591 |
| 原始查询 | SmilChr06G002846 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | P0479H10.4-1; symbol=P0479H10.4-1; hit=Os06g0232000; species=rice; confidence=medium |
| 产物 | P0479H10.4-1; symbol=P0479H10.4-1; hit=Os06g0232000; species=rice; confidence=medium |
| Arabidopsis | AT3G29075 (AT3G29075)glycine-rich protein [Source:NCBI gene (formerly Entrezgene);Acc:822552] identity=48.1; qcov=0.387; evalue=1.2e-24; confidence=low |
| Rice | Os06g0232000 (P0479H10.4-1)- identity=37.1; qcov=1.2; evalue=3.6e-32; confidence=medium |
| GO | GO:0070300 (phosphatidic acid binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130989591 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057769554.1 |
| 2 | Nucleus | 细胞核 | 0.80000 | XP_057769554.1 |
| 3 | Nucleoplasm | 核质 | 0.40000 | XP_057769554.1 |
| 4 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057769554.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057769554.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:41230307 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr6:41230486 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A23,B15 |
Chr6:41230624 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B119,B91,C60,C83 |
Chr6:41230692 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B90 |
Chr6:41230700 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B47 |
Chr6:41230874 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C65 |
Chr6:41230951 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B125,C44 |
Chr6:41231019 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C51 |
Chr6:41231042 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C1 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。