当前解析结果
SmilChr06G002955| 统一新 Gene ID | SmilChr06G002955 |
|---|---|
| 名称 | SmilChr06G002955 |
| 描述 | uncharacterized SmilChr06G002955 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 42359163 - 42360998 / - |
| NCBI Gene ID | LOC130990977 |
|---|---|
| GeneID | 130990977 |
| locus_tag | - |
| NCBI Name | LOC130990977 |
| 原始查询 | SmilChr06G002955 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669]; symbol=MUG3; hit=AT1G06740; species=arabidopsis; confidence=low |
| 产物 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669]; symbol=MUG3; hit=AT1G06740; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G06740 (MUG3)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3766669] identity=27.5; qcov=0.633; evalue=5.44e-30; confidence=low |
| Rice | Os12g0597300- identity=27.9; qcov=0.629; evalue=2.91e-29; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130990977 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057771169.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057771169.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057771169.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057771169.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057771169.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:42359381 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A3,B43 |
Chr6:42359404 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr6:42359418 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr6:42359428 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr6:42359815 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | B64,B99 |
Chr6:42359815 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B64,B99 |
Chr6:42359817 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A11 |
Chr6:42359852 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B64,B99 |
Chr6:42359979 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B67 |
Chr6:42360065 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C51 |
Chr6:42360081 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C51 |
Chr6:42360107 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B12,C23,C41 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。