当前解析结果
SmilChr06G003079| 统一新 Gene ID | SmilChr06G003079 |
|---|---|
| 名称 | SmilChr06G003079 |
| 描述 | protein FLX-like 2 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 43678225 - 43682753 / + |
| NCBI Gene ID | LOC130989806 |
|---|---|
| GeneID | 130989806 |
| locus_tag | - |
| NCBI Name | LOC130989806 |
| 原始查询 | SmilChr06G003079 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein FLX-like 2 |
| 产物 | protein FLX-like 2 |
| Arabidopsis | AT1G67170 (AT1G67170)sarcolemmal membrane-associated protein [Source:NCBI gene (formerly Entrezgene);Acc:843037] identity=48.2; qcov=0.709; evalue=1.03e-93; confidence=high |
| Rice | Os02g0192100- identity=49.4; qcov=0.524; evalue=2.35e-61; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130989806 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057769888.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057769888.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057769888.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057769888.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057769888.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:43680276 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B90,B92 |
Chr6:43680278 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
Chr6:43680429 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr6:43680504 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr6:43681318 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B36,B83,C28,C59 |
Chr6:43681842 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B75,C55 |
Chr6:43681851 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C10 |
Chr6:43681912 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C74,D4 |
Chr6:43682072 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C10 |
Chr6:43682077 |
C |
CAT |
2bp_insertion | stop_gained,frameshift_variant | 1 | B6 |
Chr6:43682077 |
C |
CAT |
2bp_insertion | CDS_variant | 1 | B6 |
Chr6:43682308 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C18 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。