当前解析结果
SmilChr06G003092| 统一新 Gene ID | SmilChr06G003092 |
|---|---|
| 名称 | SmilChr06G003092 |
| 描述 | uncharacterized SmilChr06G003092 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 43774304 - 43777180 / - |
| NCBI Gene ID | LOC130989818 |
|---|---|
| GeneID | 130989818 |
| locus_tag | - |
| NCBI Name | LOC130989818 |
| 原始查询 | SmilChr06G003092 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | golgin family A protein [Source:NCBI gene (formerly Entrezgene);Acc:831445]; symbol=AT5G15880; hit=AT5G15880; species=arabidopsis; confidence=high |
| 产物 | golgin family A protein [Source:NCBI gene (formerly Entrezgene);Acc:831445]; symbol=AT5G15880; hit=AT5G15880; species=arabidopsis; confidence=high |
| Arabidopsis | AT5G15880 (AT5G15880)golgin family A protein [Source:NCBI gene (formerly Entrezgene);Acc:831445] identity=56.7; qcov=1; evalue=5.54e-134; confidence=high |
| Rice | Os09g0108400 (P0584E12.40-1)- identity=52; qcov=1; evalue=2.23e-89; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130989818 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 0.80000 | XP_057769907.1 |
| 2 | Nucleus membrane | 核膜 | 0.40000 | XP_057769907.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057769907.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057769907.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057769907.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:43774424 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A23 |
Chr6:43774442 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B101,C48 |
Chr6:43774455 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A19,B46,C32,C45,C68 |
Chr6:43774471 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A25,B110,C18,C39,C63 |
Chr6:43774526 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A11,B100,D11 |
Chr6:43774590 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A1,B119,B91,B97,C6 |
Chr6:43774591 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B66,B98,C53,C60,C78 |
Chr6:43774652 |
TGC |
T |
2bp_deletion | frameshift_variant | 1 | B71 |
Chr6:43774652 |
TGC |
T |
2bp_deletion | CDS_variant | 1 | B71 |
Chr6:43774766 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A2,B28,B35,B93,D2 |
Chr6:43774809 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr6:43775718 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A25,B110,C18,C39,C63 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。