Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr06G003108`

染色体: Chr06 坐标: 43925183-43927272 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr06G003108`
名称	SmilChr06G003108
描述	calcium uniporter protein 2, mitochondrial-like
染色体 / SeqID	Chr06 / NC_080392.1
坐标与链方向	43925183 - 43927272 / `+`

ID 对照

NCBI Gene ID	`LOC130989834`
GeneID	`130989834`
locus_tag	`-`
NCBI Name	`LOC130989834`
原始查询	`SmilChr06G003108`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	calcium uniporter protein 2, mitochondrial-like
产物	calcium uniporter protein 2%2C mitochondrial-like
Arabidopsis	`AT2G23790` (AT2G23790) calcium uniporter (DUF607) [Source:NCBI gene (formerly Entrezgene);Acc:816911] identity=45.1; qcov=0.979; evalue=2.41e-98; confidence=high
Rice	`Os10g0501500` - identity=43.9; qcov=0.852; evalue=7.15e-71; confidence=medium
GO	GO:0005262 (calcium channel activity); GO:0005743 (mitochondrial inner membrane); GO:0015292 (uniporter activity); GO:0036444 (calcium import into the mitochondrion); GO:0051560 (mitochondrial calcium ion homeostasis); GO:1990246 (uniplex complex)
KEGG	-
Pfam	PF04678 (MCU)
InterPro	-
eggNOG	-
NR	GeneID:130989834

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057769941.1`
2	Mitochondrion membrane	线粒体膜	1.00000	`XP_057769941.1`
3	Mitochondrion inner membrane	线粒体内膜	1.00000	`XP_057769941.1`
4	Nucleus	细胞核	0.00000	`XP_057769941.1`
5	Chromosome	染色体	0.00000	`XP_057769941.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr6:43925500`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B104,B59
`Chr6:43925774`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr6:43925925`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B125,B22,C44,C87
`Chr6:43925931`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A24,B46,C13
`Chr6:43926291`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B125,B22,C44,C87
`Chr6:43926763`	`T`	`TA`	1bp_insertion	frameshift_variant	1	B70
`Chr6:43926763`	`T`	`TA`	1bp_insertion	CDS_variant	1	B70
`Chr6:43926764`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B70
`Chr6:43926841`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B14,B82
`Chr6:43926851`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A24,B24,C13,C5

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057769941.1

358 aa

179

358

MCU

PF04678 MCU 158-336 aa

XP_057769942.1

337 aa

168

337

MCU

PF04678 MCU 158-315 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057769941.1`	Pfam	`PF04678`	MCU	Family	158	336	1.8e-45	155.9	Mitochondrial calcium uniporter
`XP_057769942.1`	Pfam	`PF04678`	MCU	Family	158	315	9.2e-48	163.4	Mitochondrial calcium uniporter

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057913959.1
TTAGTGAAATGTAGTTTATTCCTTCACGGCCACGGGCCATCTATTTAGGAAATCTTTATTTTATTTTAATTTTAATAGTATAAATTATTTCTTCAGCTATATATAAGAGTAATACCTCCTCGAGCCAAATTCATTACCACATCTCGCGTCTGTCGTTTCCGCGCAATTCTCTCTATCGATAATCGAGTTTGGATTCATCAATGGCGTTGAAGAGATTGTTAGCTCAACGCCTCTTCGGCAAATCTAGAATCACCAACGCC...

XM_057913958.1
GTGAAATGTAGTTTATTCCTTCACGGCCACGGGCCATCTATTTAGGAAATCTTTATTTTATTTTAATTTTAATAGTATAAATTATTTCTTCAGCTATATATAAGAGTAATACCTCCTCGAGCCAAATTCATTACCACATCTCGCGTCTGTCGTTTCCGCGCAATTCTCTCTATCGATAATCGAGTTTGGATTCATCAATGGCGTTGAAGAGATTGTTAGCTCAACGCCTCTTCGGCAAATCTAGAATCACCAACGCCGCC...

CDS

2 records

下载 CDS FASTA

LOC130989834
ATGGCGTTGAAGAGATTGTTAGCTCAACGCCTCTTCGGCAAATCTAGAATCACCAACGCCGCCGTGACCAACTGCCGCGTCTCCTCCCCATGCACCGCCGCGCTCTCCAAGGCGATGGCGTCGAACAAGCTCGCGTCCGATCCCGGCGACGACGGCATGTTCCGCCGCTACCTCCACCGCCAGTCGGGGGCGGCGGCCTCCGCCGCCGCCTCGAGATTCCTCCCCACCGGGGAGAAGCTTCTCGAGAGGATCCGAGAGAT...

Protein

2 records

下载 Protein FASTA

XP_057769941.1
MALKRLLAQRLFGKSRITNAAVTNCRVSSPCTAALSKAMASNKLASDPGDDGMFRRYLHRQSGAAASAAASRFLPTGEKLLERIREMDIARSRIERDDGQLRQAEKEEAARLTVKDAVKILKVSQLEIIKARLRQIERDQISYSELVEICSKECSSDDHAIEFAKMLDQSGSVIVLGNIVYIRPEQEIETNVWHPDLFKRDGDFYLRVVKAIQSLIIPVPPHSLNESRMFEEMERQKAAIDREAKALVQRELLFGLGYFV...

XP_057769942.1
MALKRLLAQRLFGKSRITNAAVTNCRVSSPCTAALSKAMASNKLASDPGDDGMFRRYLHRQSGAAASAAASRFLPTGEKLLERIREMDIARSRIERDDGQLRQAEKEEAARLTVKDAVKILKVSQLEIIKARLRQIERDQISYSELVEICSKECSSDDHAIEFAKMLDQSGSVIVLGNIVYIRPEQVVKAIQSLIIPVPPHSLNESRMFEEMERQKAAIDREAKALVQRELLFGLGYFVVQTVALMRLTFWELSWDVMEP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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