当前解析结果
SmilChr06G003135| 统一新 Gene ID | SmilChr06G003135 |
|---|---|
| 名称 | SmilChr06G003135 |
| 描述 | uncharacterized SmilChr06G003135 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 44255463 - 44258418 / + |
| NCBI Gene ID | LOC130991014 |
|---|---|
| GeneID | 130991014 |
| locus_tag | - |
| NCBI Name | LOC130991014 |
| 原始查询 | SmilChr06G003135 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:839634]; symbol=AT1G27435; hit=AT1G27435; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:839634]; symbol=AT1G27435; hit=AT1G27435; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G27435 (AT1G27435)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:839634] identity=66.7; qcov=0.33; evalue=1.21e-23; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991014 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057771199.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057771199.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057771199.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057771199.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057771199.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:44256850 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B48,C36 |
Chr6:44256896 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A21,C82 |
Chr6:44256921 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C28,C45,D11 |
Chr6:44256951 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C28,C45,D11 |
Chr6:44256958 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A20,B130,C16 |
Chr6:44256979 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B105,B38,B39,C76,D8 |
Chr6:44257007 |
G |
A |
EMS_canonical_SNV | stop_gained | 23 | A16,A3,A4,B113,B126,B18,B24,B35,B40,B6,B87,B9,B94,B95,C10,C29,C51,C54,C56,C62,C63,C68,D9 |
Chr6:44257012 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B20,C48,C9 |
Chr6:44257017 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C45 |
Chr6:44257030 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A23,B71,C54 |
Chr6:44257105 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B53,B8 |
Chr6:44257115 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A22,B58,B61,B71 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。