当前解析结果
SmilChr06G003197| 统一新 Gene ID | SmilChr06G003197 |
|---|---|
| 名称 | SmilChr06G003197 |
| 描述 | uncharacterized SmilChr06G003197 |
| 染色体 / SeqID | Chr06 / NC_080392.1 |
| 坐标与链方向 | 44841129 - 44842100 / + |
| NCBI Gene ID | LOC130991029 |
|---|---|
| GeneID | 130991029 |
| locus_tag | - |
| NCBI Name | LOC130991029 |
| 原始查询 | SmilChr06G003197 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859]; symbol=MUG7; hit=AT3G05850; species=arabidopsis; confidence=low |
| 产物 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859]; symbol=MUG7; hit=AT3G05850; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G05850 (MUG7)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859] identity=26; qcov=0.749; evalue=8.96e-24; confidence=low |
| Rice | Os12g0621300- identity=26.8; qcov=0.774; evalue=6.9e-20; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991029 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057771214.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057771214.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057771214.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057771214.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057771214.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr6:44841210 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr6:44841237 |
C |
T |
EMS_canonical_SNV | stop_gained | 11 | A9,B1,B140,B25,B37,B49,B83,B85,C27,C59,C78 |
Chr6:44841250 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B107,B119,B94,D2 |
Chr6:44841252 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B101,B140,B91,C43,C70 |
Chr6:44841297 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B33 |
Chr6:44841309 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B33,B37,B69,C38 |
Chr6:44841341 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr6:44841372 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B7 |
Chr6:44841492 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr6:44841494 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B21,C49,C71,C9,D8 |
Chr6:44841546 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B21 |
Chr6:44841602 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C14 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。