Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000124`

染色体: Chr07 坐标: 727444-732204 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000124`
名称	SmilChr07G000124
描述	CBL-interacting serine/threonine-protein kinase 7-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	727444 - 732204 / `+`

ID 对照

NCBI Gene ID	`LOC130991317`
GeneID	`130991317`
locus_tag	`-`
NCBI Name	`LOC130991317`
原始查询	`SmilChr07G000124`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	CBL-interacting serine/threonine-protein kinase 7-like
产物	CBL-interacting serine/threonine-protein kinase 7-like
Arabidopsis	`AT3G23000` (CIPK7) CBL-interacting protein kinase 7 [Source:NCBI gene (formerly Entrezgene);Acc:821874] identity=55.2; qcov=0.897; evalue=1.25e-150; confidence=high
Rice	`Os03g0634400` (OsCIPK07) - identity=51.4; qcov=0.977; evalue=2.19e-131; confidence=high
GO	GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0007165 (signal transduction)
KEGG	-
Pfam	PF00069 (Pkinase); PF03822 (NAF); PF07714 (PK_Tyr_Ser-Thr); PF14531 (Kinase-like)
InterPro	-
eggNOG	-
NR	GeneID:130991317

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057771434.1`
2	Nucleus	细胞核	0.60000	`XP_057771434.1`
3	Cytoplasm	细胞质	0.60000	`XP_057771434.1`
4	Cell membrane	细胞膜	0.20000	`XP_057771434.1`
5	Chromosome	染色体	0.00000	`XP_057771434.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:728139`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C28
`Chr7:728430`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C53
`Chr7:728431`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C39
`Chr7:728500`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C38
`Chr7:728513`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B104,B11,B114,B134,B95
`Chr7:728588`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B37,B42,B43,B77
`Chr7:728628`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A22,D6
`Chr7:728726`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B98
`Chr7:728806`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B110
`Chr7:728844`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B119
`Chr7:728871`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	C46,C55,C7,D9
`Chr7:728891`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B124

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057771434.1

438 aa

219

438

Pkinase

PK_Tyr_Ser-Thr

Kinase-like

NAF

PF00069 Pkinase 31-288 aa PF07714 PK_Tyr_Ser-Thr 32-284 aa PF14531 Kinase-like 117-271 aa PF03822 NAF 323-377 aa

XP_057771435.1

438 aa

219

438

Pkinase

PK_Tyr_Ser-Thr

Kinase-like

NAF

PF00069 Pkinase 31-288 aa PF07714 PK_Tyr_Ser-Thr 32-284 aa PF14531 Kinase-like 117-271 aa PF03822 NAF 323-377 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057771434.1`	Pfam	`PF00069`	Pkinase	Domain	31	288	1.9e-70	238.0	Protein kinase domain
`XP_057771434.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	32	284	1.5e-39	136.5	Protein tyrosine and serine/threonine kinase
`XP_057771434.1`	Pfam	`PF14531`	Kinase-like	Family	117	271	3.3e-07	30.6	Kinase-like
`XP_057771434.1`	Pfam	`PF03822`	NAF	Domain	323	377	1.4e-16	61.0	NAF domain
`XP_057771435.1`	Pfam	`PF00069`	Pkinase	Domain	31	288	1.9e-70	238.0	Protein kinase domain
`XP_057771435.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	32	284	1.5e-39	136.5	Protein tyrosine and serine/threonine kinase
`XP_057771435.1`	Pfam	`PF14531`	Kinase-like	Family	117	271	3.3e-07	30.6	Kinase-like
`XP_057771435.1`	Pfam	`PF03822`	NAF	Domain	323	377	1.4e-16	61.0	NAF domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XR_009091130.1
CATAAACATATTCCAATTTTATTTTTTATTTTCCCTAACTATTGTTACATGTGACTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCACACTATAAAACCTACACACACAATCACACACTACCCGTCCAGCCTCCAAGTCTAGACCCAAATGGGCCCTACTCCGACGCCCCCCTCCGCCCCCCAGATCCGGCGAACCACCAGCGCCGGCGGCGGCAGCGGCTCCATCATTCTCGACAAATACCAGCTCGGCCGCCTCCTCGG...

XR_009091132.1
TATTCCAATTTTATTTTTTATTTTCCCTAACTATTGTTACATGTGACTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCACACTATAAAACCTACACACACAATCACACACTACCCGTCCAGCCTCCAAGTCTAGACCCAAATGGGCCCTACTCCGACGCCCCCCTCCGCCCCCCAGATCCGGCGAACCACCAGCGCCGGCGGCGGCAGCGGCTCCATCATTCTCGACAAATACCAGCTCGGCCGCCTCCTCGGCCGCGGCA...

CDS

2 records

下载 CDS FASTA

LOC130991317
ATGGGCCCTACTCCGACGCCCCCCTCCGCCCCCCAGATCCGGCGAACCACCAGCGCCGGCGGCGGCAGCGGCTCCATCATTCTCGACAAATACCAGCTCGGCCGCCTCCTCGGCCGCGGCAGCTTCGCCAAGGTGTACCTCGCCCGCCTCCTCGACCACCCCGACGCCGCCGAGGTGGCCATCAAGGTCATCGACAAGGCCGCCACCGTGGACGCCGCCATGGAGCCCCGCATCGTCCGCGAGGTCTCCGCCATGCGCCG...

Protein

2 records

下载 Protein FASTA

XP_057771434.1
MGPTPTPPSAPQIRRTTSAGGGSGSIILDKYQLGRLLGRGSFAKVYLARLLDHPDAAEVAIKVIDKAATVDAAMEPRIVREVSAMRRLHHHPNILNLHEVMATKTKIYLVMELAPGGELFAKLSRCRRFSESAARRYFHQVISALRFCHQNGVFHRDIKPQNLLLDHNGILKITDFGLSALSEHKIDGLVRTACGTPAYTAPEVVSRKGYDGEKADAWSCGVLLYVFLVGNLPFDDTNLSNMYRAMHRRALEFPDWVSKS...

XP_057771435.1
MGPTPTPPSAPQIRRTTSAGGGSGSIILDKYQLGRLLGRGSFAKVYLARLLDHPDAAEVAIKVIDKAATVDAAMEPRIVREVSAMRRLHHHPNILNLHEVMATKTKIYLVMELAPGGELFAKLSRCRRFSESAARRYFHQVISALRFCHQNGVFHRDIKPQNLLLDHNGILKITDFGLSALSEHKIDGLVRTACGTPAYTAPEVVSRKGYDGEKADAWSCGVLLYVFLVGNLPFDDTNLSNMYRAMHRRALEFPDWVSKS...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

JBrowse

跳转到基因组浏览器