当前解析结果
SmilChr07G000214| 统一新 Gene ID | SmilChr07G000214 |
|---|---|
| 名称 | SmilChr07G000214 |
| 描述 | uncharacterized SmilChr07G000214 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 1372660 - 1376525 / - |
| NCBI Gene ID | LOC130991412 |
|---|---|
| GeneID | 130991412 |
| locus_tag | - |
| NCBI Name | LOC130991412 |
| 原始查询 | SmilChr07G000214 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | neurogenic locus notch-like protein [Source:NCBI gene (formerly Entrezgene);Acc:827129]; symbol=AT4G14746; hit=AT4G14746; species=arabidopsis; confidence=medium |
| 产物 | neurogenic locus notch-like protein [Source:NCBI gene (formerly Entrezgene);Acc:827129]; symbol=AT4G14746; hit=AT4G14746; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G14746 (AT4G14746)neurogenic locus notch-like protein [Source:NCBI gene (formerly Entrezgene);Acc:827129] identity=44.2; qcov=0.945; evalue=2.85e-48; confidence=medium |
| Rice | Os11g0582000- identity=42.8; qcov=0.697; evalue=9.59e-38; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991412 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057771610.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057771610.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057771610.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057771610.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057771610.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:1373007 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B34,B68 |
Chr7:1373250 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
Chr7:1373259 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr7:1373291 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C6 |
Chr7:1373893 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:1374822 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B56,B96 |
Chr7:1374832 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:1374873 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B58 |
Chr7:1376417 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A23,B5,C8 |
Chr7:1376435 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B24,C16,C24,C39,C83 |
Chr7:1376440 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B84,C41 |
Chr7:1376487 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A6,B129,C18,C55,C86 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。