当前解析结果
SmilChr07G000231| 统一新 Gene ID | SmilChr07G000231 |
|---|---|
| 名称 | SmilChr07G000231 |
| 描述 | serine/threonine-protein kinase STY13-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 1498227 - 1502313 / + |
| NCBI Gene ID | LOC130991429 |
|---|---|
| GeneID | 130991429 |
| locus_tag | - |
| NCBI Name | LOC130991429 |
| 原始查询 | SmilChr07G000231 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | serine/threonine-protein kinase STY13-like |
| 产物 | serine/threonine-protein kinase STY13-like |
| Arabidopsis | AT3G22750 (AT3G22750)Protein kinase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:821846] identity=76.5; qcov=0.916; evalue=0; confidence=high |
| Rice | Os03g0638800 (OSJNBb0029I19.9)- identity=74.8; qcov=0.944; evalue=0; confidence=high |
| GO | GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0005886 (plasma membrane); GO:0006468 (protein phosphorylation) |
| KEGG | - |
| Pfam | PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr); PF17667 (Pkinase_fungal) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991429 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057771632.1 |
| 2 | Cell membrane | 细胞膜 | 1.00000 | XP_057771632.1 |
| 3 | Cytoplasm | 细胞质 | 0.40000 | XP_057771632.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057771632.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057771632.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:1499336 |
AC |
A |
1bp_deletion | frameshift_variant | 1 | B21 |
Chr7:1499336 |
AC |
A |
1bp_deletion | CDS_variant | 1 | B21 |
Chr7:1500641 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr7:1500871 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B59 |
Chr7:1501158 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A24,C3,C56,C77,C87 |
Chr7:1501170 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A1,C47 |
Chr7:1501218 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B99 |
Chr7:1501455 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B36 |
Chr7:1501936 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr7:1501987 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B131,B26,B38,B39 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057771632.1PF07714
PK_Tyr_Ser-Thr 89-361 aa
PF00069
Pkinase 91-359 aa
PF17667
Pkinase_fungal 215-294 aa
XP_057771633.1PF07714
PK_Tyr_Ser-Thr 89-361 aa
PF00069
Pkinase 91-359 aa
PF17667
Pkinase_fungal 215-294 aa
XP_057771634.1PF07714
PK_Tyr_Ser-Thr 89-361 aa
PF00069
Pkinase 91-359 aa
PF17667
Pkinase_fungal 215-294 aa
XP_057771635.1PF07714
PK_Tyr_Ser-Thr 89-361 aa
PF00069
Pkinase 91-359 aa
PF17667
Pkinase_fungal 215-294 aa
XP_057771637.1PF07714
PK_Tyr_Ser-Thr 89-361 aa
PF00069
Pkinase 91-359 aa
PF17667
Pkinase_fungal 215-294 aa
XP_057771638.1PF07714
PK_Tyr_Ser-Thr 89-361 aa
PF00069
Pkinase 91-359 aa
PF17667
Pkinase_fungal 215-294 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057771632.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 89 | 361 | 3.9e-58 | 197.5 | Protein tyrosine and serine/threonine kinase |
XP_057771632.1 |
Pfam | PF00069 |
Pkinase | Domain | 91 | 359 | 1.7e-46 | 159.5 | Protein kinase domain |
XP_057771632.1 |
Pfam | PF17667 |
Pkinase_fungal | Domain | 215 | 294 | 9.6e-07 | 28.6 | Fungal protein kinase |
XP_057771633.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 89 | 361 | 3.9e-58 | 197.5 | Protein tyrosine and serine/threonine kinase |
XP_057771633.1 |
Pfam | PF00069 |
Pkinase | Domain | 91 | 359 | 1.7e-46 | 159.5 | Protein kinase domain |
XP_057771633.1 |
Pfam | PF17667 |
Pkinase_fungal | Domain | 215 | 294 | 9.6e-07 | 28.6 | Fungal protein kinase |
XP_057771634.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 89 | 361 | 3.9e-58 | 197.5 | Protein tyrosine and serine/threonine kinase |
XP_057771634.1 |
Pfam | PF00069 |
Pkinase | Domain | 91 | 359 | 1.7e-46 | 159.5 | Protein kinase domain |
XP_057771634.1 |
Pfam | PF17667 |
Pkinase_fungal | Domain | 215 | 294 | 9.6e-07 | 28.6 | Fungal protein kinase |
XP_057771635.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 89 | 361 | 3.9e-58 | 197.5 | Protein tyrosine and serine/threonine kinase |
XP_057771635.1 |
Pfam | PF00069 |
Pkinase | Domain | 91 | 359 | 1.7e-46 | 159.5 | Protein kinase domain |
XP_057771635.1 |
Pfam | PF17667 |
Pkinase_fungal | Domain | 215 | 294 | 9.6e-07 | 28.6 | Fungal protein kinase |
XP_057771637.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 89 | 361 | 3.9e-58 | 197.5 | Protein tyrosine and serine/threonine kinase |
XP_057771637.1 |
Pfam | PF00069 |
Pkinase | Domain | 91 | 359 | 1.7e-46 | 159.5 | Protein kinase domain |
XP_057771637.1 |
Pfam | PF17667 |
Pkinase_fungal | Domain | 215 | 294 | 9.6e-07 | 28.6 | Fungal protein kinase |
XP_057771638.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 89 | 361 | 3.9e-58 | 197.5 | Protein tyrosine and serine/threonine kinase |
XP_057771638.1 |
Pfam | PF00069 |
Pkinase | Domain | 91 | 359 | 1.7e-46 | 159.5 | Protein kinase domain |
XP_057771638.1 |
Pfam | PF17667 |
Pkinase_fungal | Domain | 215 | 294 | 9.6e-07 | 28.6 | Fungal protein kinase |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
6 records
下载 cDNA FASTA6 records
下载 CDS FASTA6 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。