当前解析结果
SmilChr07G000251| 统一新 Gene ID | SmilChr07G000251 |
|---|---|
| 名称 | SmilChr07G000251 |
| 描述 | uncharacterized SmilChr07G000251 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 1597444 - 1598162 / + |
| NCBI Gene ID | LOC130991448 |
|---|---|
| GeneID | 130991448 |
| locus_tag | - |
| NCBI Name | LOC130991448 |
| 原始查询 | SmilChr07G000251 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817763]; symbol=AT2G32030; hit=AT2G32030; species=arabidopsis; confidence=high |
| 产物 | Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817763]; symbol=AT2G32030; hit=AT2G32030; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G32030 (AT2G32030)Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817763] identity=56.2; qcov=0.976; evalue=8.61e-63; confidence=high |
| Rice | Os03g0664800 (OSJNBb0031A14.3)- identity=46.1; qcov=1.07; evalue=8.95e-47; confidence=medium |
| GO | GO:0016747 (acyltransferase activity, transferring groups other than amino-acyl groups) |
| KEGG | - |
| Pfam | PF00583 (Acetyltransf_1); PF13302 (Acetyltransf_3) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991448 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 1.00000 | XP_057771666.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057771666.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057771666.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057771666.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057771666.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:1597669 |
GA |
G |
1bp_deletion | frameshift_variant | 1 | C48 |
Chr7:1597669 |
GA |
G |
1bp_deletion | CDS_variant | 1 | C48 |
Chr7:1597730 |
GC |
G |
1bp_deletion | frameshift_variant | 7 | B3,B4,B54,C12,C15,C21,C42 |
Chr7:1597732 |
GT |
G |
1bp_deletion | frameshift_variant | 25 | A22,A24,A3,B11,B111,B123,B17,B3,B4,B54,B6,B65,B72,B75,B84,B86,C12,C14,C15,C21,C23,C42,C72,C86,D8 |
Chr7:1597734 |
C |
CGG |
2bp_insertion | frameshift_variant | 21 | A22,A24,A3,B11,B111,B123,B17,B4,B6,B65,B72,B75,B84,B86,C14,C15,C23,C42,C72,C86,D8 |
Chr7:1597735 |
GT |
G |
1bp_deletion | frameshift_variant | 10 | B52,B65,B69,B74,B75,C48,C53,C61,C8,D8 |
Chr7:1597744 |
A |
AG |
1bp_insertion | frameshift_variant | 1 | C61 |
Chr7:1597744 |
A |
AG |
1bp_insertion | CDS_variant | 1 | C61 |
Chr7:1597746 |
C |
CCG |
2bp_insertion | frameshift_variant | 2 | B74,C53 |
Chr7:1597746 |
C |
CCG |
2bp_insertion | CDS_variant | 2 | B74,C53 |
Chr7:1597747 |
T |
TG |
1bp_insertion | frameshift_variant | 2 | B74,C53 |
Chr7:1597747 |
T |
TG |
1bp_insertion | CDS_variant | 2 | B74,C53 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057771666.1PF13302
Acetyltransf_3 11-137 aa
PF00583
Acetyltransf_1 37-136 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057771666.1 |
Pfam | PF13302 |
Acetyltransf_3 | Domain | 11 | 137 | 8e-25 | 88.9 | Acetyltransferase (GNAT) domain |
XP_057771666.1 |
Pfam | PF00583 |
Acetyltransf_1 | Family | 37 | 136 | 1.3e-09 | 39.1 | Acetyltransferase (GNAT) family |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。