Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000282`

染色体: Chr07 坐标: 1819978-1828185 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000282`
名称	SmilChr07G000282
描述	uncharacterized SmilChr07G000282
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	1819978 - 1828185 / `-`

ID 对照

NCBI Gene ID	`LOC130991472`
GeneID	`130991472`
locus_tag	`-`
NCBI Name	`LOC130991472`
原始查询	`SmilChr07G000282`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:NCBI gene (formerly Entrezgene);Acc:827150]; symbol=AT4G14920; hit=AT4G14920; species=arabidopsis; confidence=high
产物	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:NCBI gene (formerly Entrezgene);Acc:827150]; symbol=AT4G14920; hit=AT4G14920; species=arabidopsis; confidence=high
Arabidopsis	`AT4G14920` (AT4G14920) Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:NCBI gene (formerly Entrezgene);Acc:827150] identity=45.9; qcov=0.779; evalue=0; confidence=high
Rice	`Os03g0747600` - identity=45.6; qcov=0.493; evalue=1.22e-177; confidence=medium
GO	GO:0003714 (transcription corepressor activity); GO:0016747 (acyltransferase activity, transferring groups other than amino-acyl groups); GO:0045892 (negative regulation of DNA-templated transcription)
KEGG	-
Pfam	PF00628 (PHD); PF16135 (TDBD); PF22970 (DUF7028); PF23209 (IDM1_C)
InterPro	-
eggNOG	-
NR	GeneID:130991472

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057771705.1`
2	Chromosome	染色体	0.00000	`XP_057771705.1`
3	Centromere	着丝粒	0.00000	`XP_057771705.1`
4	Chromatin	染色质	0.00000	`XP_057771705.1`
5	Telomere	端粒	0.00000	`XP_057771705.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:1820378`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A15
`Chr7:1820429`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B128,B88,C8
`Chr7:1820463`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B4,C15
`Chr7:1820478`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A25,B65,C22,C47
`Chr7:1820496`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A18,B100
`Chr7:1820515`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B65,C29
`Chr7:1820534`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:1820536`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B65
`Chr7:1820651`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B114,B95,C13
`Chr7:1820751`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	A21,B124,B41,B78,C10
`Chr7:1820763`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B129
`Chr7:1820834`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B81

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057771705.1

1308 aa

654

1308

DUF7028

TDBD

PHD

IDM1_C

PF22970 DUF7028 379-439 aa PF16135 TDBD 633-683 aa PF00628 PHD 711-750 aa PF23209 IDM1_C 858-997 aa

XP_057771706.1

1308 aa

654

1308

DUF7028

TDBD

PHD

IDM1_C

PF22970 DUF7028 379-439 aa PF16135 TDBD 633-683 aa PF00628 PHD 711-750 aa PF23209 IDM1_C 858-997 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057771705.1`	Pfam	`PF22970`	DUF7028	Domain	379	439	1.2e-14	54.7	Domain of unknown function (DUF7028)
`XP_057771705.1`	Pfam	`PF16135`	TDBD	Domain	633	683	1.8e-22	79.8	Tify domain binding domain
`XP_057771705.1`	Pfam	`PF00628`	PHD	Domain	711	750	8.2e-08	32.9	PHD-finger
`XP_057771705.1`	Pfam	`PF23209`	IDM1_C	Domain	858	997	4.4e-58	196.0	Increased DNA methylation 1, C-terminal domain
`XP_057771706.1`	Pfam	`PF22970`	DUF7028	Domain	379	439	1.2e-14	54.7	Domain of unknown function (DUF7028)
`XP_057771706.1`	Pfam	`PF16135`	TDBD	Domain	633	683	1.8e-22	79.8	Tify domain binding domain
`XP_057771706.1`	Pfam	`PF00628`	PHD	Domain	711	750	8.2e-08	32.9	PHD-finger
`XP_057771706.1`	Pfam	`PF23209`	IDM1_C	Domain	858	997	4.4e-58	196.0	Increased DNA methylation 1, C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057915723.1
CAGAAATGCAGAAAAACAAAAAAGGAGAAGAAATCCGACGCAGAAAAGAATCAAAACACTTTTCTGAAGAAATCTGACTTCATTCAATCATACTCTGCAACAGCAGCAGCAGCAGCAACTGCAAGACCAATCCATAAATCTTTTCTCCTCGGATTCCATTTTCACCGCAGTAATTAGTAATTACTATTCCACCAAGAATCAGTATTATTTGAAATAATATTAGTATGTAGTTGAATTTTAAAAATGGCGATGACAAACGG...

XM_057915722.1
CAGAAATGCAGAAAAACAAAAAAGGAGAAGAAATCCGACGCAGAAAAGAATCAAAACACTTTTCTGAAGAAATCTGACTTCATTCAATCATACTCTGCAACAGCAGCAGCAGCAGCAACTGCAAGACCAATCCATAAATCTTTTCTCCTCGGATTCCATTTTCACCGCAGTAATTAGTAATTACTATTCCACCAAGAATCAGTATTATTTGAAATAATATTAGTATGTAGTTGAATTTTAAAAATGGCGATGACAAACGG...

CDS

2 records

下载 CDS FASTA

LOC130991472
ATGGAAGAGAGTATGAGATCAGGGGGTGGTGTGTTGAAGAAGAAGAAGAAGAATTCGTCAGGGTGTTTGATTATTAAAAAGAAGGTAGAAAATGGGAATTCGGGTGGGGTGTGGGAGGGTTTGAGTAGTCATGGTAATGAGAGAAAGAGGCCGAGGTTCGTTGCAGGCGGCTTCGGCGCGAGTGATGAAGATGAGTCATTGGGGTTTATGAAGAGAAAAGTGAATGGCAAGAGCTTGCACAATGGCTCCATGGGTTACAG...

Protein

2 records

下载 Protein FASTA

XP_057771705.1
MEESMRSGGGVLKKKKKNSSGCLIIKKKVENGNSGGVWEGLSSHGNERKRPRFVAGGFGASDEDESLGFMKRKVNGKSLHNGSMGYRRSEFENRVYERSNDGIDLGDERRRRRRSELGSYEFDEYHEYDERRMRDEYLEDRYKMVGCRGGENSKDFVIGSSRGNLVADRRHSFHFDGSGSGRSKGGEHTGLRSKGFDLEEVEEEMPASLLRSKHPEVADEPIRLQGKNGVLKVMVNRKKKVELHSRHSRYDSRGVEERAR...

XP_057771706.1
MEESMRSGGGVLKKKKKNSSGCLIIKKKVENGNSGGVWEGLSSHGNERKRPRFVAGGFGASDEDESLGFMKRKVNGKSLHNGSMGYRRSEFENRVYERSNDGIDLGDERRRRRRSELGSYEFDEYHEYDERRMRDEYLEDRYKMVGCRGGENSKDFVIGSSRGNLVADRRHSFHFDGSGSGRSKGGEHTGLRSKGFDLEEVEEEMPASLLRSKHPEVADEPIRLQGKNGVLKVMVNRKKKVELHSRHSRYDSRGVEERAR...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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