Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000326`

染色体: Chr07 坐标: 2220627-2226069 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000326`
名称	SmilChr07G000326
描述	mitogen-activated protein kinase kinase kinase NPK1-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	2220627 - 2226069 / `-`

ID 对照

NCBI Gene ID	`LOC130991522`
GeneID	`130991522`
locus_tag	`-`
NCBI Name	`LOC130991522`
原始查询	`SmilChr07G000326`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	mitogen-activated protein kinase kinase kinase NPK1-like
产物	mitogen-activated protein kinase kinase kinase NPK1-like
Arabidopsis	`AT3G06030` (NP3) NPK1-related protein kinase 3 [Source:NCBI gene (formerly Entrezgene);Acc:819774] identity=51.7; qcov=0.989; evalue=0; confidence=high
Rice	`Os08g0421800` - identity=47.4; qcov=1.03; evalue=0; confidence=high
GO	GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation)
KEGG	-
Pfam	PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr); PF17667 (Pkinase_fungal)
InterPro	-
eggNOG	-
NR	GeneID:130991522

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057771766.1`
2	Cytosol	细胞质基质	0.60000	`XP_057771766.1`
3	Nucleus	细胞核	0.20000	`XP_057771766.1`
4	Chromosome	染色体	0.00000	`XP_057771766.1`
5	Centromere	着丝粒	0.00000	`XP_057771766.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:2221242`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A15
`Chr7:2221272`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B112,B13
`Chr7:2221295`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B6
`Chr7:2221845`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr7:2221998`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B93
`Chr7:2222155`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C80
`Chr7:2222558`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B28
`Chr7:2223014`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C9
`Chr7:2224640`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C42,C85
`Chr7:2225620`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A1,A13,B117
`Chr7:2225642`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A1,A13,B117
`Chr7:2225647`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	A1,A13,B117,B18

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057771766.1

726 aa

363

726

Pkinase

PK_Tyr_Ser-Thr

Pkinase_fungal

PF00069 Pkinase 120-380 aa PF07714 PK_Tyr_Ser-Thr 122-376 aa PF17667 Pkinase_fungal 233-308 aa

XP_057771767.1

726 aa

363

726

Pkinase

PK_Tyr_Ser-Thr

Pkinase_fungal

PF00069 Pkinase 120-380 aa PF07714 PK_Tyr_Ser-Thr 122-376 aa PF17667 Pkinase_fungal 233-308 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057771766.1`	Pfam	`PF00069`	Pkinase	Domain	120	380	4.5e-72	243.3	Protein kinase domain
`XP_057771766.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	122	376	3.6e-46	158.3	Protein tyrosine and serine/threonine kinase
`XP_057771766.1`	Pfam	`PF17667`	Pkinase_fungal	Domain	233	308	5.1e-06	26.2	Fungal protein kinase
`XP_057771767.1`	Pfam	`PF00069`	Pkinase	Domain	120	380	4.5e-72	243.3	Protein kinase domain
`XP_057771767.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	122	376	3.6e-46	158.3	Protein tyrosine and serine/threonine kinase
`XP_057771767.1`	Pfam	`PF17667`	Pkinase_fungal	Domain	233	308	5.1e-06	26.2	Fungal protein kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057915784.1
TCAAACCTTCTTTTTCCCTCCTCTGTCTTCACTTTCTTCACTGAAATGAATTGGAAGTCATAAACAAGCCCTAATTTTTTCTCTCTCACTACACTAGTATCCTTGGTTTCTCTCGCTCTTCAATCCGTATCTCTCCGGCGATGCAGGATTTCATCGGCTCTGTTCGCCGATCTCTGGTTTTCAAACCTCCCGGCGAAGAATCGGCCGGGTTTGGGGGAATTGTCGAGAAATTGGGGTCGAGCATCCGGAAATCTCGAATC...

XM_057915783.1
TTCTTTTTCCCTCCTCTGTCTTCACTTTCTTCACTGAAATGAATTGGAAGTCATAAACAAGCCCTAATTTTTTCTCTCTCACTACACTAGTATCCTTGGTTTCTCTCGCTCTTCAATCCGTATCTCTCCGGCGATGCAGGATTTCATCGGCTCTGTTCGCCGATCTCTGGTTTTCAAACCTCCCGGCGAAGAATCGGCCGGGTTTGGGGGAATTGTCGAGAAATTGGGGTCGAGCATCCGGAAATCTCGAATCGGTATTT...

CDS

2 records

下载 CDS FASTA

LOC130991522
ATGCAGGATTTCATCGGCTCTGTTCGCCGATCTCTGGTTTTCAAACCTCCCGGCGAAGAATCGGCCGGGTTTGGGGGAATTGTCGAGAAATTGGGGTCGAGCATCCGGAAATCTCGAATCGGTATTTTCGCTAAGCCTCCGGTTCACGCACTGCCGCCAATTGCGACGCCGCCGCGGAGAAACGCGAGAGCGGAGCCGTCGGTGGAGGAGGAGCAACTGCCGCCGATGGAAGGATCGACTGAGGATGAGCCGCCGATAAC...

Protein

2 records

下载 Protein FASTA

XP_057771766.1
MQDFIGSVRRSLVFKPPGEESAGFGGIVEKLGSSIRKSRIGIFAKPPVHALPPIATPPRRNARAEPSVEEEQLPPMEGSTEDEPPITRGREDRMLTPKSMKEEESKKRKEVSVPPLIRWRKGELIGCGAFGRVHMGMNLDSGELLAVKEVSIAANSASKKTQEYIGELEKEVNLLKNLSHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIRRYTNQLLLGLEYLHKNKIMHRDIKGANILVDNKGCI...

XP_057771767.1
MQDFIGSVRRSLVFKPPGEESAGFGGIVEKLGSSIRKSRIGIFAKPPVHALPPIATPPRRNARAEPSVEEEQLPPMEGSTEDEPPITRGREDRMLTPKSMKEEESKKRKEVSVPPLIRWRKGELIGCGAFGRVHMGMNLDSGELLAVKEVSIAANSASKKTQEYIGELEKEVNLLKNLSHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIRRYTNQLLLGLEYLHKNKIMHRDIKGANILVDNKGCI...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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