当前解析结果
SmilChr07G000384| 统一新 Gene ID | SmilChr07G000384 |
|---|---|
| 名称 | SmilChr07G000384 |
| 描述 | uncharacterized SmilChr07G000384 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 2582586 - 2584175 / + |
| NCBI Gene ID | LOC130993035 |
|---|---|
| GeneID | 130993035 |
| locus_tag | - |
| NCBI Name | LOC130993035 |
| 原始查询 | SmilChr07G000384 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | OsFbox602; symbol=OsFbox602; hit=Os11g0533800; species=rice; confidence=weak |
| 产物 | OsFbox602; symbol=OsFbox602; hit=Os11g0533800; species=rice; confidence=weak |
| Arabidopsis | AT1G58310 (AT1G58310)F-box/RNI-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:842200] identity=26; qcov=0.386; evalue=8.14e-06; confidence=low |
| Rice | Os11g0533800 (OsFbox602)- identity=23.4; qcov=0.639; evalue=2.51e-07; confidence=weak |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993035 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057773739.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057773739.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057773739.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057773739.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057773739.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:2582611 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:2582619 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr7:2582644 |
T |
TCC |
2bp_insertion | frameshift_variant | 23 | A24,A3,B1,B10,B107,B112,B118,B121,B122,B124,B139,B29,B44,B54,C2,C3,C45,C62,C65,C75,C81,C82,D5 |
Chr7:2582646 |
ATT |
A |
2bp_deletion | frameshift_variant | 23 | A24,A3,B1,B10,B107,B112,B118,B121,B122,B124,B139,B29,B44,B54,C2,C3,C45,C62,C65,C75,C81,C82,D5 |
Chr7:2582669 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:2582682 |
G |
GA |
1bp_insertion | frameshift_variant | 1 | C86 |
Chr7:2582682 |
G |
GA |
1bp_insertion | CDS_variant | 1 | C86 |
Chr7:2582735 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A6 |
Chr7:2582737 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A6 |
Chr7:2582743 |
A |
AG |
1bp_insertion | frameshift_variant | 42 | A24,A7,B10,B101,B104,B107,B108,B117,B12,B121,B125,B128,B130,B131,B138,B39,B4,B42,B55,B60,B64,B7,B70,B82,B90,B97,B98,C11,C16,C27,C28,C34,C35,C45,C67,C73,C74,C8,C83,C9,D1,D6 |
Chr7:2582749 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B72,B85,C56,C65 |
Chr7:2582755 |
A |
ATC |
2bp_insertion | frameshift_variant | 37 | A1,A14,A19,A21,A8,B1,B101,B112,B117,B118,B121,B122,B124,B130,B17,B26,B28,B38,B44,B51,B54,B61,B64,B8,C10,C18,C2,C23,C32,C46,C62,C70,C71,C81,C82,C84,C86 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。