当前解析结果
SmilChr07G000428| 统一新 Gene ID | SmilChr07G000428 |
|---|---|
| 名称 | SmilChr07G000428 |
| 描述 | uncharacterized SmilChr07G000428 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 2974828 - 2976150 / - |
| NCBI Gene ID | LOC130993044 |
|---|---|
| GeneID | 130993044 |
| locus_tag | - |
| NCBI Name | LOC130993044 |
| 原始查询 | SmilChr07G000428 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | F-box/FBD/LRR protein [Source:NCBI gene (formerly Entrezgene);Acc:824076]; symbol=AT3G49150; hit=AT3G49150; species=arabidopsis; confidence=low |
| 产物 | F-box/FBD/LRR protein [Source:NCBI gene (formerly Entrezgene);Acc:824076]; symbol=AT3G49150; hit=AT3G49150; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G49150 (AT3G49150)F-box/FBD/LRR protein [Source:NCBI gene (formerly Entrezgene);Acc:824076] identity=31.3; qcov=0.45; evalue=1.99e-11; confidence=low |
| Rice | -- |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993044 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057773747.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057773747.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057773747.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057773747.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057773747.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:2974851 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C32,C68 |
Chr7:2974938 |
AGT |
A |
2bp_deletion | frameshift_variant | 24 | A2,A3,A4,B127,B131,B134,B140,B2,B21,B24,B37,B59,B7,B79,B87,B90,C16,C20,C33,C58,C65,C69,D1,D11 |
Chr7:2975006 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B115,B58,B67,C19,C52 |
Chr7:2975369 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B111,C18,C67,C7 |
Chr7:2975384 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B111,C18,C67,C7 |
Chr7:2975388 |
TTG |
T |
2bp_deletion | frameshift_variant | 1 | C85 |
Chr7:2975388 |
TTG |
T |
2bp_deletion | CDS_variant | 1 | C85 |
Chr7:2975391 |
C |
CCT |
2bp_insertion | frameshift_variant | 1 | C85 |
Chr7:2975391 |
C |
CCT |
2bp_insertion | CDS_variant | 1 | C85 |
Chr7:2975393 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C85 |
Chr7:2975428 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B134,C54 |
Chr7:2975452 |
GT |
G |
1bp_deletion | frameshift_variant | 1 | B44 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。