当前解析结果
SmilChr07G000429| 统一新 Gene ID | SmilChr07G000429 |
|---|---|
| 名称 | SmilChr07G000429 |
| 描述 | uncharacterized SmilChr07G000429 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 2981285 - 2986880 / - |
| NCBI Gene ID | LOC130991624 |
|---|---|
| GeneID | 130991624 |
| locus_tag | - |
| NCBI Name | LOC130991624 |
| 原始查询 | SmilChr07G000429 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | F-box/FBD/LRR protein [Source:NCBI gene (formerly Entrezgene);Acc:824076]; symbol=AT3G49150; hit=AT3G49150; species=arabidopsis; confidence=low |
| 产物 | F-box/FBD/LRR protein [Source:NCBI gene (formerly Entrezgene);Acc:824076]; symbol=AT3G49150; hit=AT3G49150; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G49150 (AT3G49150)F-box/FBD/LRR protein [Source:NCBI gene (formerly Entrezgene);Acc:824076] identity=27.1; qcov=0.54; evalue=1.62e-10; confidence=low |
| Rice | -- |
| GO | GO:0005515 (protein binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991624 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057771917.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057771917.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057771917.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057771917.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057771917.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:2981683 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C32,C68 |
Chr7:2981768 |
G |
GC |
1bp_insertion | frameshift_variant | 35 | A22,A5,A9,B104,B109,B110,B12,B121,B139,B19,B24,B32,B37,B38,B39,B41,B52,B54,B55,B56,B57,B73,B85,B9,B96,B98,B99,C1,C19,C22,C51,C55,C72,C8,C80 |
Chr7:2981955 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C84 |
Chr7:2982059 |
C |
CA |
1bp_insertion | frameshift_variant | 8 | B115,B20,B58,B66,B67,C19,C52,D5 |
Chr7:2982106 |
G |
GT |
1bp_insertion | frameshift_variant | 2 | C20,C54 |
Chr7:2982106 |
G |
GT |
1bp_insertion | CDS_variant | 2 | C20,C54 |
Chr7:2982115 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B123 |
Chr7:2982171 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B122,B31 |
Chr7:2982316 |
A |
ACT |
2bp_insertion | frameshift_variant | 7 | B106,B16,B41,B75,C11,C24,C27 |
Chr7:2982318 |
TTC |
T |
2bp_deletion | frameshift_variant | 7 | B106,B16,B41,B75,C11,C24,C27 |
Chr7:2982445 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A18,B34,B78,B95 |
Chr7:2982475 |
AG |
* |
1bp_deletion | CDS_variant | 1 | C12 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。