当前解析结果
SmilChr07G000432| 统一新 Gene ID | SmilChr07G000432 |
|---|---|
| 名称 | SmilChr07G000432 |
| 描述 | uncharacterized SmilChr07G000432 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 3024968 - 3026335 / - |
| NCBI Gene ID | LOC130993046 |
|---|---|
| GeneID | 130993046 |
| locus_tag | - |
| NCBI Name | LOC130993046 |
| 原始查询 | SmilChr07G000432 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | F-box/RNI-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:821150]; symbol=AT3G03040; hit=AT3G03040; species=arabidopsis; confidence=low |
| 产物 | F-box/RNI-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:821150]; symbol=AT3G03040; hit=AT3G03040; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G03040 (AT3G03040)F-box/RNI-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:821150] identity=32.2; qcov=0.396; evalue=8.61e-09; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130993046 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057773749.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057773749.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057773749.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057773749.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057773749.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:3025375 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B34,B62,B80 |
Chr7:3025415 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B115 |
Chr7:3025499 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A15,B130,B84,B94,C45 |
Chr7:3025572 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B68,B78,C1 |
Chr7:3025618 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C10,C14 |
Chr7:3025655 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C9 |
Chr7:3025774 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B51,C49 |
Chr7:3025814 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B68,B78,C1 |
Chr7:3025815 |
A |
AG |
1bp_insertion | frameshift_variant | 3 | A13,B17,C56 |
Chr7:3025815 |
A |
AG |
1bp_insertion | CDS_variant | 3 | A13,B17,C56 |
Chr7:3025936 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B56,B96 |
Chr7:3025944 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C33,C46 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。