当前解析结果
SmilChr07G000455| 统一新 Gene ID | SmilChr07G000455 |
|---|---|
| 名称 | SmilChr07G000455 |
| 描述 | uncharacterized SmilChr07G000455 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 3221278 - 3225546 / + |
| NCBI Gene ID | LOC130991652 |
|---|---|
| GeneID | 130991652 |
| locus_tag | - |
| NCBI Name | LOC130991652 |
| 原始查询 | SmilChr07G000455 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | NAD(P)-binding Rossmann-fold superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:818494]; symbol=EMB2799; hit=AT2G39080; species=arabidopsis; confidence=high |
| 产物 | NAD(P)-binding Rossmann-fold superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:818494]; symbol=EMB2799; hit=AT2G39080; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G39080 (EMB2799)NAD(P)-binding Rossmann-fold superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:818494] identity=67.7; qcov=0.965; evalue=1.53e-151; confidence=high |
| Rice | Os01g0367100 (PHD1)- identity=70.6; qcov=0.834; evalue=6.66e-145; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991652 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057771963.1 |
| 2 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057771965.1 |
| 3 | Chloroplast stroma | 叶绿体基质 | 1.00000 | XP_057771963.1 |
| 4 | Endoplasmic reticulum membrane | 内质网膜 | 0.40000 | XP_057771965.1 |
| 5 | Golgi apparatus | 高尔基体 | 0.20000 | XP_057771965.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:3221514 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C62,C78,C85 |
Chr7:3221535 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A24,D2 |
Chr7:3221557 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B117 |
Chr7:3221597 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:3222290 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B119,B7,C79,D3 |
Chr7:3222294 |
T |
TC |
1bp_insertion | frameshift_variant | 4 | B119,B7,C79,D3 |
Chr7:3222294 |
T |
TC |
1bp_insertion | CDS_variant | 4 | B119,B7,C79,D3 |
Chr7:3222370 |
T |
TA |
1bp_insertion | frameshift_variant | 5 | B119,B127,B7,C79,D3 |
Chr7:3222370 |
T |
TA |
1bp_insertion | CDS_variant | 5 | B119,B127,B7,C79,D3 |
Chr7:3222546 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr7:3222569 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B136 |
Chr7:3223068 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B119,B127,B7,C79,D3 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
6 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。