Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000487`

染色体: Chr07 坐标: 3403858-3409109 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000487`
名称	SmilChr07G000487
描述	inositol-pentakisphosphate 2-kinase-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	3403858 - 3409109 / `-`

ID 对照

NCBI Gene ID	`LOC130991680`
GeneID	`130991680`
locus_tag	`-`
NCBI Name	`LOC130991680`
原始查询	`SmilChr07G000487`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	inositol-pentakisphosphate 2-kinase-like
产物	inositol-pentakisphosphate 2-kinase-like
Arabidopsis	`AT1G22100` (AT1G22100) Inositol-pentakisphosphate 2-kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:838815] identity=54.8; qcov=0.937; evalue=5.74e-170; confidence=high
Rice	`Os04g0661200` (OsIPK1) - identity=49.4; qcov=0.935; evalue=3.93e-150; confidence=high
GO	GO:0005524 (ATP binding); GO:0005634 (nucleus); GO:0032958 (inositol phosphate biosynthetic process); GO:0035299 (inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity)
KEGG	smil00562 (Inositol phosphate metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil04070 (Phosphatidylinositol signaling system - Salvia miltiorrhiza (redroot sage))
Pfam	PF06090 (Ins_P5_2-kin)
InterPro	-
eggNOG	-
NR	GeneID:130991680

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytoplasm	细胞质	1.00000	`XP_057772003.1`
2	Cytosol	细胞质基质	1.00000	`XP_057772003.1`
3	Nucleus	细胞核	0.80000	`XP_057772005.1`
4	Nucleoplasm	核质	0.40000	`XP_057772003.1`
5	Chromosome	染色体	0.00000	`XP_057772003.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:3405017`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C70
`Chr7:3405082`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C15
`Chr7:3405083`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B117
`Chr7:3405686`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B112,B137
`Chr7:3405858`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B12,B24
`Chr7:3405894`	`AG`	`A`	1bp_deletion	frameshift_variant	21	A10,A25,A6,B11,B139,B31,B35,B42,B43,B48,B5,B61,B64,B65,C31,C34,C35,C40,C43,C45,C63
`Chr7:3406001`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B112,B137
`Chr7:3406082`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B98,C32,C55,C68,C7
`Chr7:3406438`	`GA`	`G`	1bp_deletion	frameshift_variant	1	A2
`Chr7:3406438`	`GA`	`G`	1bp_deletion	CDS_variant	1	A2
`Chr7:3406440`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B127,B40,B74,B81,C2
`Chr7:3406513`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	C26,C27,C39

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057772003.1

470 aa

235

470

Ins_P5_2-kin

PF06090 Ins_P5_2-kin 15-425 aa

XP_057772004.1

468 aa

234

468

Ins_P5_2-kin

PF06090 Ins_P5_2-kin 15-423 aa

XP_057772005.1

465 aa

232

465

Ins_P5_2-kin

PF06090 Ins_P5_2-kin 15-425 aa

XP_057772006.1

463 aa

232

463

Ins_P5_2-kin

PF06090 Ins_P5_2-kin 15-423 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057772003.1`	Pfam	`PF06090`	Ins_P5_2-kin	Family	15	425	4.1e-112	376.0	Inositol-pentakisphosphate 2-kinase
`XP_057772004.1`	Pfam	`PF06090`	Ins_P5_2-kin	Family	15	423	2.7e-113	379.9	Inositol-pentakisphosphate 2-kinase
`XP_057772005.1`	Pfam	`PF06090`	Ins_P5_2-kin	Family	15	425	3.9e-112	376.0	Inositol-pentakisphosphate 2-kinase
`XP_057772006.1`	Pfam	`PF06090`	Ins_P5_2-kin	Family	15	423	2.6e-113	379.9	Inositol-pentakisphosphate 2-kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057916022.1
GGCCCAATGACGCAGGTAATTTTTTTTTTTTTTTTTACACCAATGGCGCAGGTAATTAAGCTCTGATTTACTTTTACATTTTTTTACTTTTCACTGTCTCTCTCAGCTCGCATAAGATTTCACGAGTCAAGCAACCAGTTCTCTCTCTCTAAACCCTAATAAATCCCCACTGTTGCGGCTACACTCCGGCATTACATGTGCTATCGTACTCATTATCTTCGTATCAAAGTCATGAATTATCTTAATTGAGCTTCTTGCAG...

XM_057916021.1
TTTTCACTGTCTCTCTCAGCTCGCATAAGATTTCACGAGTCAAGCAACCAGTTCTCTCTCTCTAAACCCTAATAAATCCCCACTGTTGCGGCTACACTCCGGCATTACATGTGCTATCGTACTCATTATCTTCGTATCAAAGTCATGAATTATCTTAATTGAGCTTCTTGCAGTCGATGAACAAAATCCTAGCAAATGGTTCCCCTAAACGAATTGTGTTCAGGCACTTTTCCGGCTATGTTACGACATTAATAGGAAAT...

CDS

4 records

下载 CDS FASTA

LOC130991680
ATGGCTGCAATTTTGCAAGCCAAAGATGCGGAGGAATGGACTTACAGAGGAGAAGGAGCTGTGAACCTAGTTCTTGCTTACTGTGGAAGCTCTCCTCAATTTGTTGGAAAGGTTTTAAGGATACAAAAAGTTCCAAATGATGGACCTGAATTTGAGAATGGTCATTCGGCTCTAGTCAACCATGAATCCCTCTTGTGGGGAAAATTTGAAGGCATAGTTTCAGCACCTACAAAGGAAATTGCGGAGCAGCTGTATGTGCA...

Protein

4 records

下载 Protein FASTA

XP_057772003.1
MAAILQAKDAEEWTYRGEGAVNLVLAYCGSSPQFVGKVLRIQKVPNDGPEFENGHSALVNHESLLWGKFEGIVSAPTKEIAEQLYVQKVMCPLLGSEHVDSGIHVLVSRGFLEAVDNKVLCQRPSWRVDAARVNPLCDSVLLIADHSVFPHVSGSLKEDFCVSVEIKPKGGFLPISEFIAEENAVKKRITRFKMHQALKLHQGKISQISKYDPLDLFSGSKDGIQRAIKALLLTPQNNFRVFLNGSLIFGGMGGAADSTR...

XP_057772004.1
MAAILQAKDAEEWTYRGEGAVNLVLAYCGSSPQFVGKVLRIQKVPNDGPEFENGHSALVNHESLLWGKFEGIVSAPTKEIAEQLYVQKVMCPLLGSEHVDSGIHVLVSRGFLEAVDNKVLCQRPSWRVDAARVNPLCDSVLLIADHSVFPHGSLKEDFCVSVEIKPKGGFLPISEFIAEENAVKKRITRFKMHQALKLHQGKISQISKYDPLDLFSGSKDGIQRAIKALLLTPQNNFRVFLNGSLIFGGMGGAADSTRTA...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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