当前解析结果
SmilChr07G000524| 统一新 Gene ID | SmilChr07G000524 |
|---|---|
| 名称 | SmilChr07G000524 |
| 描述 | uncharacterized SmilChr07G000524 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 3660947 - 3662349 / + |
| NCBI Gene ID | LOC130991713 |
|---|---|
| GeneID | 130991713 |
| locus_tag | - |
| NCBI Name | LOC130991713 |
| 原始查询 | SmilChr07G000524 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | F-box/RNI-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:842946]; symbol=AT1G66290; hit=AT1G66290; species=arabidopsis; confidence=weak |
| 产物 | F-box/RNI-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:842946]; symbol=AT1G66290; hit=AT1G66290; species=arabidopsis; confidence=weak |
| Arabidopsis | AT1G66290 (AT1G66290)F-box/RNI-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:842946] identity=24.1; qcov=0.917; evalue=6.04e-06; confidence=weak |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991713 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057772057.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057772057.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057772057.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057772057.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057772057.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:3661469 |
G |
A |
EMS_canonical_SNV | stop_gained | 1 | C8 |
Chr7:3661469 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C8 |
Chr7:3661471 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B135,C64,C66,C78,C85 |
Chr7:3661514 |
GTA |
G |
2bp_deletion | frameshift_variant | 5 | A25,B71,B78,C42,D8 |
Chr7:3661514 |
GTA |
G |
2bp_deletion | CDS_variant | 5 | A25,B71,B78,C42,D8 |
Chr7:3661612 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A8 |
Chr7:3661626 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B80,B87 |
Chr7:3661651 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B138,B34 |
Chr7:3661895 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:3661905 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B24,B33,B53 |
Chr7:3661999 |
T |
TA |
1bp_insertion | stop_gained,frameshift_variant | 4 | B34,B51,C18,C70 |
Chr7:3661999 |
T |
TA |
1bp_insertion | CDS_variant | 4 | B34,B51,C18,C70 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。