Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000629`

染色体: Chr07 坐标: 4246683-4250848 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000629`
名称	SmilChr07G000629
描述	mitochondrial thiamine diphosphate carrier 2-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	4246683 - 4250848 / `+`

ID 对照

NCBI Gene ID	`LOC130991875`
GeneID	`130991875`
locus_tag	`-`
NCBI Name	`LOC130991875`
原始查询	`SmilChr07G000629`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	mitochondrial thiamine diphosphate carrier 2-like
产物	mitochondrial thiamine diphosphate carrier 2-like
Arabidopsis	`AT5G48970` (AT5G48970) Mitochondrial substrate carrier family protein [Source:NCBI gene (formerly Entrezgene);Acc:834956] identity=76.2; qcov=1; evalue=1.09e-149; confidence=high
Rice	`Os01g0934200` - identity=78.1; qcov=1; evalue=7.33e-155; confidence=high
GO	GO:0005743 (mitochondrial inner membrane); GO:0015234 (thiamine transmembrane transporter activity); GO:0030974 (thiamine pyrophosphate transmembrane transport)
KEGG	-
Pfam	PF00153 (Mito_carr)
InterPro	-
eggNOG	-
NR	GeneID:130991875

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Mitochondrion	线粒体	1.00000	`XP_057772294.1`
2	Mitochondrion membrane	线粒体膜	1.00000	`XP_057772294.1`
3	Mitochondrion inner membrane	线粒体内膜	1.00000	`XP_057772294.1`
4	Nucleus	细胞核	0.00000	`XP_057772294.1`
5	Chromosome	染色体	0.00000	`XP_057772294.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:4248867`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C53,D11
`Chr7:4248903`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:4249265`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr7:4249554`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B69
`Chr7:4249578`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B20,B3,B7,C8
`Chr7:4249849`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B87,D6
`Chr7:4250347`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A11
`Chr7:4250431`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B132

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057772294.1

329 aa

164

329

Mito_carr

PF00153 Mito_carr 11-111 aa PF00153 Mito_carr 122-208 aa PF00153 Mito_carr 226-324 aa

XP_057772295.1

329 aa

164

329

Mito_carr

PF00153 Mito_carr 11-111 aa PF00153 Mito_carr 122-208 aa PF00153 Mito_carr 226-324 aa

XP_057772296.1

329 aa

164

329

Mito_carr

PF00153 Mito_carr 11-111 aa PF00153 Mito_carr 122-208 aa PF00153 Mito_carr 226-324 aa

XP_057772297.1

264 aa

132

264

Mito_carr

PF00153 Mito_carr 11-111 aa PF00153 Mito_carr 122-208 aa PF00153 Mito_carr 226-259 aa

XP_057772298.1

264 aa

132

264

Mito_carr

PF00153 Mito_carr 11-111 aa PF00153 Mito_carr 122-208 aa PF00153 Mito_carr 226-259 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057772294.1`	Pfam	`PF00153`	Mito_carr	Repeat	11	111	3.3e-74	245.4	Mitochondrial carrier protein
`XP_057772294.1`	Pfam	`PF00153`	Mito_carr	Repeat	122	208	3.3e-74	245.4	Mitochondrial carrier protein
`XP_057772294.1`	Pfam	`PF00153`	Mito_carr	Repeat	226	324	3.3e-74	245.4	Mitochondrial carrier protein
`XP_057772295.1`	Pfam	`PF00153`	Mito_carr	Repeat	11	111	3.3e-74	245.4	Mitochondrial carrier protein
`XP_057772295.1`	Pfam	`PF00153`	Mito_carr	Repeat	122	208	3.3e-74	245.4	Mitochondrial carrier protein
`XP_057772295.1`	Pfam	`PF00153`	Mito_carr	Repeat	226	324	3.3e-74	245.4	Mitochondrial carrier protein
`XP_057772296.1`	Pfam	`PF00153`	Mito_carr	Repeat	11	111	3.3e-74	245.4	Mitochondrial carrier protein
`XP_057772296.1`	Pfam	`PF00153`	Mito_carr	Repeat	122	208	3.3e-74	245.4	Mitochondrial carrier protein
`XP_057772296.1`	Pfam	`PF00153`	Mito_carr	Repeat	226	324	3.3e-74	245.4	Mitochondrial carrier protein
`XP_057772297.1`	Pfam	`PF00153`	Mito_carr	Repeat	11	111	8.9e-57	189.5	Mitochondrial carrier protein
`XP_057772297.1`	Pfam	`PF00153`	Mito_carr	Repeat	122	208	8.9e-57	189.5	Mitochondrial carrier protein
`XP_057772297.1`	Pfam	`PF00153`	Mito_carr	Repeat	226	259	8.9e-57	189.5	Mitochondrial carrier protein
`XP_057772298.1`	Pfam	`PF00153`	Mito_carr	Repeat	11	111	8.9e-57	189.5	Mitochondrial carrier protein
`XP_057772298.1`	Pfam	`PF00153`	Mito_carr	Repeat	122	208	8.9e-57	189.5	Mitochondrial carrier protein
`XP_057772298.1`	Pfam	`PF00153`	Mito_carr	Repeat	226	259	8.9e-57	189.5	Mitochondrial carrier protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

5 records

下载 cDNA FASTA

XM_057916312.1
CGGCCCAAAATCAGAATTTGACAGCTCCATCAGACCATCACTAACTAAATTTTTTGTCAAAAGAATATTCTTGAAAATTTCACGCTTCCGTTCTATGTCGACAGTGTTTCCAAGCGCCTAAACGCGGCACAAAAACCTTTATATTGGTATTATTAATCATAAATTTGGAAATTCTTTTGACTATCTTTGGAAATTGTTCAATGTTTTCTTTCACCCCTCCTCCAATCTTTGCAGGTCGGTTTCTTTTATTCTTTCTTATA...

XM_057916311.1
CGGCCCAAAATCAGAATTTGACAGCTCCATCAGACCATCACTAACTAAATTTTTTGTCAAAAGAATATTCTTGAAAATTTCACGCTTCCGTTCTATGTCGACAGTGTTTCCAAGCGCCTAAACGCGGCACAAAAACCTTTATATTGGTATTATTAATCATAAATTTGGAAATTCTTTTGACTATCTTTGGAAATTGTTCAATGTTTTCTTTCACCCCTCCTCCAATCTTTGCAGATTTTTGAAGTGTGATTGCTGAAGGA...

CDS

5 records

下载 CDS FASTA

LOC130991875
ATGGAGGAACATGCGCAGCTGAAAAGGGCTTTGATTGATGCATCTGCTGGCGCCATTTCCGGTGGGATTTCAAGAACCGTGACCTCACCGCTCGACGTGATTAAAATCAGATTTCAGGTTCAATTGGAACCCACTACACAATGGGCTTTGCTTCGGAGAGATCCATATAGTCGATCAAAATATACTGGTATGCTGCAAGCAACAAAGGACATTTTTAGGGAGGAAGGCTTGCCGGGTTTCTGGAGGGGGAATGTCCCGGC...

Protein

5 records

下载 Protein FASTA

XP_057772294.1
MEEHAQLKRALIDASAGAISGGISRTVTSPLDVIKIRFQVQLEPTTQWALLRRDPYSRSKYTGMLQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFTVLHKLKSLVSGSSKSEDHMNISPYLSYVSGALAGCAATVGSYPFDLIRTLLASQGEPKVYPNMRAAFSDILAKRSFRGLYAGLTPTLIEIVPYAGLQFGTYDTFKRWTMGWNQYRSGYDTEADDSLSSFQLFLCGLAAGTCAKAVCHPLDVVKKRFQVEG...

XP_057772295.1
MEEHAQLKRALIDASAGAISGGISRTVTSPLDVIKIRFQVQLEPTTQWALLRRDPYSRSKYTGMLQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFTVLHKLKSLVSGSSKSEDHMNISPYLSYVSGALAGCAATVGSYPFDLIRTLLASQGEPKVYPNMRAAFSDILAKRSFRGLYAGLTPTLIEIVPYAGLQFGTYDTFKRWTMGWNQYRSGYDTEADDSLSSFQLFLCGLAAGTCAKAVCHPLDVVKKRFQVEG...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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