当前解析结果
SmilChr07G000650| 统一新 Gene ID | SmilChr07G000650 |
|---|---|
| 名称 | SmilChr07G000650 |
| 描述 | uncharacterized SmilChr07G000650 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 4385531 - 4386395 / - |
| NCBI Gene ID | LOC130991901 |
|---|---|
| GeneID | 130991901 |
| locus_tag | - |
| NCBI Name | LOC130991901 |
| 原始查询 | SmilChr07G000650 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glycine-rich protein [Source:NCBI gene (formerly Entrezgene);Acc:819863]; symbol=AT3G06780; hit=AT3G06780; species=arabidopsis; confidence=low |
| 产物 | glycine-rich protein [Source:NCBI gene (formerly Entrezgene);Acc:819863]; symbol=AT3G06780; hit=AT3G06780; species=arabidopsis; confidence=low |
| Arabidopsis | AT3G06780 (AT3G06780)glycine-rich protein [Source:NCBI gene (formerly Entrezgene);Acc:819863] identity=53.3; qcov=0.319; evalue=1.22e-16; confidence=low |
| Rice | Os01g0346700- identity=35.7; qcov=0.372; evalue=3.4e-08; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991901 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057772337.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 0.80000 | XP_057772337.1 |
| 3 | Chloroplast membrane | 叶绿体膜 | 0.40000 | XP_057772337.1 |
| 4 | Chloroplast stroma | 叶绿体基质 | 0.20000 | XP_057772337.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057772337.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:4385698 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B118,C55,C8 |
Chr7:4385766 |
A |
AAT |
2bp_insertion | frameshift_variant | 1 | C1 |
Chr7:4385766 |
A |
AAT |
2bp_insertion | CDS_variant | 1 | C1 |
Chr7:4385769 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B60 |
Chr7:4385794 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:4385795 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B15,B21,B86,C76 |
Chr7:4385831 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C83 |
Chr7:4385923 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr7:4385994 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B132,C64,C66 |
Chr7:4386056 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C28 |
Chr7:4386167 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B21 |
Chr7:4386192 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A2,B131,B56,B96 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。