Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000783`

染色体: Chr07 坐标: 5509128-5513526 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000783`
名称	SmilChr07G000783
描述	uncharacterized SmilChr07G000783
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	5509128 - 5513526 / `+`

ID 对照

NCBI Gene ID	`LOC130991866`
GeneID	`130991866`
locus_tag	`-`
NCBI Name	`LOC130991866`
原始查询	`SmilChr07G000783`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	K-stimulated pyrophosphate-energized sodium pump protein [Source:NCBI gene (formerly Entrezgene);Acc:836118]; symbol=AT5G59960; hit=AT5G59960; species=arabidopsis; confidence=high
产物	K-stimulated pyrophosphate-energized sodium pump protein [Source:NCBI gene (formerly Entrezgene);Acc:836118]; symbol=AT5G59960; hit=AT5G59960; species=arabidopsis; confidence=high
Arabidopsis	`AT5G59960` (AT5G59960) K-stimulated pyrophosphate-energized sodium pump protein [Source:NCBI gene (formerly Entrezgene);Acc:836118] identity=67.8; qcov=0.969; evalue=1.02e-172; confidence=high
Rice	`Os01g0151600` - identity=64.5; qcov=0.972; evalue=4.29e-163; confidence=high
GO	-
KEGG	-
Pfam	PF30847 (DUF8749)
InterPro	-
eggNOG	-
NR	GeneID:130991866

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus membrane	核膜	0.80000	`XP_057772269.1`
2	Endoplasmic reticulum	内质网	0.40000	`XP_057772269.1`
3	Nucleus	细胞核	0.20000	`XP_057772269.1`
4	Chromosome	染色体	0.00000	`XP_057772269.1`
5	Centromere	着丝粒	0.00000	`XP_057772269.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:5510382`	`TCG`	`T`	2bp_deletion	frameshift_variant	1	B137
`Chr7:5510382`	`TCG`	`T`	2bp_deletion	CDS_variant	1	B137
`Chr7:5510605`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B134
`Chr7:5510608`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B136,B82,C85
`Chr7:5511188`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B129
`Chr7:5511242`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A25,B71,C3
`Chr7:5511298`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	C35,C7,C71
`Chr7:5511973`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C7
`Chr7:5512164`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B11,B69,C52
`Chr7:5512294`	`AG`	`A`	1bp_deletion	frameshift_variant	29	A10,A8,B101,B105,B11,B118,B128,B131,B137,B17,B4,B50,B53,B54,B58,B69,B70,B8,B81,B83,B89,C12,C18,C3,C39,C4,C69,C72,C73
`Chr7:5512318`	`AG`	`A`	1bp_deletion	frameshift_variant	151	A1,A10,A11,A14,A16,A19,A22,A4,A5,A6,A7,A8,A9,B1,B10,B100,B102,B103,B104,B106,B108,B11,B110,B112,B113,B114,B117,B118,B12,B120,B122,B123,B124,B125,B126,B128,B129,B13,B133,B134,B135,B136,B138,B14,B140,B15,B16,B18,B2,B22,B23,B28,B29,B30,B32,B34,B36,B38,B39,B4,B41,B42,B43,B44,B45,B48,B49,B51,B53,B55,B56,B57,B59,B6,B63,B64,B65,B67,B68,B69,B7,B72,B73,B76,B79,B83,B84,B85,B86,B88,B9,B90,B91,B92,B96,B97,B98,C10,C12,C13,C15,C19,C20,C21,C23,C25,C26,C28,C29,C3,C33,C34,C35,C36,C37,C39,C4,C41,C45,C46,C48,C49,C5,C50,C51,C53,C54,C56,C59,C61,C63,C67,C7,C70,C72,C73,C76,C79,C8,C80,C84,C85,C87,C9,D1,D10,D11,D3,D4,D6,D9
`Chr7:5512686`	`C`	`T`	EMS_canonical_SNV	stop_gained	14	B120,B126,B136,B137,B2,B30,B37,B53,B66,B69,C21,C24,C45,C9

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057772269.1

356 aa

178

356

DUF8749

PF30847 DUF8749 15-320 aa

XP_057772270.1

356 aa

178

356

DUF8749

PF30847 DUF8749 15-320 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057772269.1`	Pfam	`PF30847`	DUF8749	Domain	15	320	2.3e-140	468.3	Domain of unknown function (DUF8749)
`XP_057772270.1`	Pfam	`PF30847`	DUF8749	Domain	15	320	2.3e-140	468.3	Domain of unknown function (DUF8749)

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057916286.1
TATTTTTCAATAAATGTCTCTTCTATTAATCAGGAGAAGATATTGATTTCTTGCTTCAAATGCTTAACTGGAGCACTATTACTTATTTGGTGTACGCATATGAATTAAATCATTGCTGACTCACCCCATTTTCTGGATAATCTCCAACTCTCACGCGTCAAATGTTTCCATTCCATAAATCTTCTCGTCGTCGGTGTATCAGTTTATGAACTATATGTATTAGTAGAGAGAGAGAGAAGGAGAGATAGCAGTTGAACTTT...

XM_057916287.1
ACTTATATGTCACTCAACTATAAAAGATGGATTTTTATTTTGGCTAATTATAAAGCACATCTGCACATGCTATTGGTATTGGTTTTGCTTTGATTCCAAGTTATACACATGTTGTATTTTAAAGCCAAAAGAAAATTCCAATCTTTTACGTGAAATTGATGTTTTGGCCATTCCATTCCTTTTAGAATTGCTAATAAATTAATTTGTAAAACAAGCTGACTTTATTATCATTTCTGAATTAACAATTTGATTACATTTCA...

CDS

2 records

下载 CDS FASTA

LOC130991866
ATGTCGACGGTGTTGACTCCTCGCGCTGCTGCTTATCTCGGTGCCGTCGCTCTCCAAATTGAGAAGAAGCTCCAACGCGCTTTAGCTTCGGCATCGCAGAGCCGAAACTTGTTGCAGGAGTTGTTCGCGGACATAGCTTTGGAGGTAGATGATCGTGCTAAAGATATCATTTTTGATGAGGGAGATGTAGTCTACGATGCAGAAGATAGAAATGGTTGTGCATACTGCTTCTACGACGTCCTCGCTGACTATTTTGTATG...

Protein

2 records

下载 Protein FASTA

XP_057772269.1
MSTVLTPRAAAYLGAVALQIEKKLQRALASASQSRNLLQELFADIALEVDDRAKDIIFDEGDVVYDAEDRNGCAYCFYDVLADYFVCVPRSGDSIIDLIVQLWSQSFASNIFCLLFYKRMFEVRFDNLDVVLRYSSALVQGAKNVFWTDVQTNARRFSSLFIYLVEEVAFRPERLKKISPQAQRDIFLLLSRFLFFYDTDDRLAILLKHFPDFPNAFLIGGPPDIFVSELADQLQELKVEPVLLHYLSHIKVLQGLEIRV...

XP_057772270.1
MSTVLTPRAAAYLGAVALQIEKKLQRALASASQSRNLLQELFADIALEVDDRAKDIIFDEGDVVYDAEDRNGCAYCFYDVLADYFVCVPRSGDSIIDLIVQLWSQSFASNIFCLLFYKRMFEVRFDNLDVVLRYSSALVQGAKNVFWTDVQTNARRFSSLFIYLVEEVAFRPERLKKISPQAQRDIFLLLSRFLFFYDTDDRLAILLKHFPDFPNAFLIGGPPDIFVSELADQLQELKVEPVLLHYLSHIKVLQGLEIRV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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