当前解析结果
SmilChr07G000807| 统一新 Gene ID | SmilChr07G000807 |
|---|---|
| 名称 | SmilChr07G000807 |
| 描述 | uncharacterized SmilChr07G000807 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 5689851 - 5692723 / + |
| NCBI Gene ID | LOC130991976 |
|---|---|
| GeneID | 130991976 |
| locus_tag | - |
| NCBI Name | LOC130991976 |
| 原始查询 | SmilChr07G000807 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836025]; symbol=AT5G59080; hit=AT5G59080; species=arabidopsis; confidence=low |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836025]; symbol=AT5G59080; hit=AT5G59080; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G59080 (AT5G59080)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:836025] identity=38.4; qcov=0.938; evalue=3.48e-20; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130991976 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057772394.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057772394.1 |
| 3 | Cytosol | 细胞质基质 | 0.20000 | XP_057772394.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057772394.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057772394.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:5690165 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B26,B8 |
Chr7:5690859 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C46 |
Chr7:5690910 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr7:5690911 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A21,B101,B44,B87,D11 |
Chr7:5691610 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C1 |
Chr7:5691729 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C4,D5 |
Chr7:5691735 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C32,C68 |
Chr7:5691879 |
TG |
T |
1bp_deletion | frameshift_variant | 4 | A2,B131,B56,B96 |
Chr7:5691879 |
TG |
T |
1bp_deletion | CDS_variant | 4 | A2,B131,B56,B96 |
Chr7:5691882 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B10,B34 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。