当前解析结果
SmilChr07G000834| 统一新 Gene ID | SmilChr07G000834 |
|---|---|
| 名称 | SmilChr07G000834 |
| 描述 | uncharacterized SmilChr07G000834 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 5927140 - 5930371 / + |
| NCBI Gene ID | LOC130992004 |
|---|---|
| GeneID | 130992004 |
| locus_tag | - |
| NCBI Name | LOC130992004 |
| 原始查询 | SmilChr07G000834 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | LRR protein [Source:NCBI gene (formerly Entrezgene);Acc:836005]; symbol=AT5G58880; hit=AT5G58880; species=arabidopsis; confidence=low |
| 产物 | LRR protein [Source:NCBI gene (formerly Entrezgene);Acc:836005]; symbol=AT5G58880; hit=AT5G58880; species=arabidopsis; confidence=low |
| Arabidopsis | AT5G58880 (AT5G58880)LRR protein [Source:NCBI gene (formerly Entrezgene);Acc:836005] identity=31.9; qcov=0.37; evalue=9.57e-25; confidence=low |
| Rice | Os01g0812050- identity=34.3; qcov=0.174; evalue=1.66e-13; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992004 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 0.60000 | XP_057772434.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057772434.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057772434.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057772434.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057772434.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:5927378 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A23,A24 |
Chr7:5927562 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B133 |
Chr7:5927659 |
A |
AG |
1bp_insertion | frameshift_variant | 3 | C32,C39,C68 |
Chr7:5927659 |
A |
AG |
1bp_insertion | CDS_variant | 3 | C32,C39,C68 |
Chr7:5927792 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A15,B4,C61 |
Chr7:5928127 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B129,B30,B82,C21,C9 |
Chr7:5928137 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B14,B44,C26 |
Chr7:5928140 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D7 |
Chr7:5928212 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B99 |
Chr7:5928233 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B91 |
Chr7:5928302 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B67,D5 |
Chr7:5928342 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。