Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr07G000850`

染色体: Chr07 坐标: 6063171-6068599 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr07G000850`
名称	SmilChr07G000850
描述	anthranilate synthase alpha subunit 2, chloroplastic-like
染色体 / SeqID	Chr07 / NC_080393.1
坐标与链方向	6063171 - 6068599 / `+`

ID 对照

NCBI Gene ID	`LOC130992024`
GeneID	`130992024`
locus_tag	`-`
NCBI Name	`LOC130992024`
原始查询	`SmilChr07G000850`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	anthranilate synthase alpha subunit 2, chloroplastic-like
产物	anthranilate synthase alpha subunit 2%2C chloroplastic-like
Arabidopsis	`AT2G29690` (ASA2) anthranilate synthase 2 [Source:NCBI gene (formerly Entrezgene);Acc:817519] identity=78.2; qcov=0.996; evalue=0; confidence=high
Rice	`Os03g0264400` (OASA2) anthranilate synthase alpha subunit 2, chloroplastic-like [Source:NCBI gene (formerly Entrezgene);Acc:4332341] identity=76.1; qcov=0.998; evalue=0; confidence=high
GO	GO:0000162 (L-tryptophan biosynthetic process); GO:0004049 (anthranilate synthase activity)
KEGG	smil00400 (Phenylalanine, tyrosine and tryptophan biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01230 (Biosynthesis of amino acids - Salvia miltiorrhiza (redroot sage))
Pfam	PF00425 (Chorismate_bind); PF30495 (Chorismate_bind_2)
InterPro	-
eggNOG	-
NR	GeneID:130992024

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057772464.1`
2	Cytosol	细胞质基质	1.00000	`XP_057772465.1`
3	Chloroplast stroma	叶绿体基质	1.00000	`XP_057772464.1`
4	Cytoplasm	细胞质	0.80000	`XP_057772465.1`
5	Nucleus	细胞核	0.00000	`XP_057772464.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr7:6063443`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B110,C14
`Chr7:6063450`	`TA`	`T`	1bp_deletion	frameshift_variant	1	C42
`Chr7:6063450`	`TA`	`T`	1bp_deletion	CDS_variant	1	C42
`Chr7:6063512`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B131,B134,B140,C84,C87
`Chr7:6063866`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C61
`Chr7:6063911`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C34
`Chr7:6063956`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A9,D9
`Chr7:6063962`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A15,B128,B4
`Chr7:6063990`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	A14,B103,C86
`Chr7:6064361`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B78
`Chr7:6064401`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C84,C87
`Chr7:6064829`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C14,C73

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057772464.1

576 aa

288

576

Chorismate_bind

Chorismate_bind_2

PF00425 Chorismate_bind 134-563 aa PF30495 Chorismate_bind_2 280-566 aa

XP_057772465.1

466 aa

233

466

Chorismate_bind

Chorismate_bind_2

PF00425 Chorismate_bind 25-453 aa PF30495 Chorismate_bind_2 170-456 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057772464.1`	Pfam	`PF00425`	Chorismate_bind	Domain	134	563	2.3e-111	373.8	chorismate binding enzyme
`XP_057772464.1`	Pfam	`PF30495`	Chorismate_bind_2	Domain	280	566	3.6e-43	149.0	Chorismate binding enzyme
`XP_057772465.1`	Pfam	`PF00425`	Chorismate_bind	Domain	25	453	1.7e-111	374.3	chorismate binding enzyme
`XP_057772465.1`	Pfam	`PF30495`	Chorismate_bind_2	Domain	170	456	1.8e-43	149.9	Chorismate binding enzyme

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057916481.1
CGACGAAACTATTTATAACATTCGAAAGATTTCCCTCATTAATGTTATGCACTGTAACAATATTGTCTGCATTTTATACTTTTAGATAATTGGAAATTTAATGTACCAAACTTTCCAACTTATTTTAAGGAAAACCTCTCTGCGTTGCGAAACTGCTTCTTTGTCTTCGTCTAGAAACTACATACTCTGTTCGAAGAAGGAAAAAATCAATTTTACATCTCAAATTCTTGATTGTTCTGTAAATGGAAACCCTAGGTTTT...

XM_057916482.1
TGGACCACTCTGTCAAGTTCAAGGAAGCTGCAAACGATGGGAATTTGATCCCTCTATACAGGCCCATATTTTCTGATCACTTGACTCCGGTGCTTGCATATAGGTGCTTGGTGAAGGAGGATGAGAGAGATGCCCCCAGTTTTCTTTTCGAATCCGTGGAGCCGGGTTTAAAAGCTTCCAATGTCTGTTATTGGAGCTCAACCAACAATGGAAATTGTGGCGAAGGAGAACATGGTAACCATAGTCGATCATTTTAAGGG...

CDS

2 records

下载 CDS FASTA

LOC130992024
ATGGAAACCCTAGGTTTTCGCTGTAACAATCCGCTTCTAGCTCCTCGTCGCACCACCACCGCCCCCGCCGCCGTTCCCTTAATAGCCACCTTCAGGACTCGTTGGGCCGTTAAATGCGGCATTTCACTTCCATCGTTGGTGGACCACTCTGTCAAGTTCAAGGAAGCTGCAAACGATGGGAATTTGATCCCTCTATACAGGCCCATATTTTCTGATCACTTGACTCCGGTGCTTGCATATAGGTGCTTGGTGAAGGAGGA...

LOC130992024
ATGTCTGTTATTGGAGCTCAACCAACAATGGAAATTGTGGCGAAGGAGAACATGGTAACCATAGTCGATCATTTTAAGGGAGAGAGGATAGAGAAGTTTGTGGAGGATCCTATGAATGTTCCACGCACATATATGGAGAAGTGGAAACCCCAGCGAATTGATGAGCTACCCGAAGCATTTTGTGGTGGTTGGGTTGGTTATTTCTCATACGACACAGTTCGTTATGTAGAAACCAAAAAGCTTCCTTTCACAAAAGCTCC...

Protein

2 records

下载 Protein FASTA

XP_057772464.1
METLGFRCNNPLLAPRRTTTAPAAVPLIATFRTRWAVKCGISLPSLVDHSVKFKEAANDGNLIPLYRPIFSDHLTPVLAYRCLVKEDERDAPSFLFESVEPGLKASNVGRYSVIGAQPTMEIVAKENMVTIVDHFKGERIEKFVEDPMNVPRTYMEKWKPQRIDELPEAFCGGWVGYFSYDTVRYVETKKLPFTKAPMDDRNLPDVHLGLYDDVIVFDHVEKKAYVIHWVRLEQYKNVEEAYDGGMNRLEALVSRVHDIQ...

XP_057772465.1
MSVIGAQPTMEIVAKENMVTIVDHFKGERIEKFVEDPMNVPRTYMEKWKPQRIDELPEAFCGGWVGYFSYDTVRYVETKKLPFTKAPMDDRNLPDVHLGLYDDVIVFDHVEKKAYVIHWVRLEQYKNVEEAYDGGMNRLEALVSRVHDIQTPRLAAGSIKLHTSLFGPSLSKSTMTGEEYQNAVIKAKEHILAGDIFQIVLSQRFERRTFADPFEVYRALRIVNPSPYMTYLQARGCILVASSPEILTRVKKGVVTNRPL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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