当前解析结果
SmilChr07G000908| 统一新 Gene ID | SmilChr07G000908 |
|---|---|
| 名称 | SmilChr07G000908 |
| 描述 | CBL-interacting protein kinase 2-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 6491609 - 6494291 / + |
| NCBI Gene ID | LOC130992082 |
|---|---|
| GeneID | 130992082 |
| locus_tag | - |
| NCBI Name | LOC130992082 |
| 原始查询 | SmilChr07G000908 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | CBL-interacting protein kinase 2-like |
| 产物 | CBL-interacting protein kinase 2-like |
| Arabidopsis | AT5G58380 (SIP1)SOS3-interacting protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:835951] identity=56; qcov=1.06; evalue=9.68e-177; confidence=high |
| Rice | Os07g0678600 (OsCIPK02)- identity=60.2; qcov=0.998; evalue=0; confidence=high |
| GO | GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation); GO:0007165 (signal transduction) |
| KEGG | - |
| Pfam | PF00069 (Pkinase); PF03822 (NAF); PF07714 (PK_Tyr_Ser-Thr) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992082 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057772538.1 |
| 2 | Cytosol | 细胞质基质 | 0.80000 | XP_057772538.1 |
| 3 | Nucleus | 细胞核 | 0.40000 | XP_057772538.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057772538.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057772538.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:6492738 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B69,C27,C65 |
Chr7:6493027 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B118,B2,B46,C78 |
Chr7:6493039 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B140,C61,D7 |
Chr7:6493075 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B140,D7 |
Chr7:6493271 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B34,B65 |
Chr7:6493522 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B137 |
Chr7:6493575 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B130,B48,C18,C45,C61 |
Chr7:6493663 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B8 |
Chr7:6493704 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B104,B21 |
Chr7:6493717 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B34,B65 |
Chr7:6493738 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B121,B85,C81,D6 |
Chr7:6493760 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B65 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057772538.1PF00069
Pkinase 12-267 aa
PF07714
PK_Tyr_Ser-Thr 13-262 aa
PF03822
NAF 297-354 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057772538.1 |
Pfam | PF00069 |
Pkinase | Domain | 12 | 267 | 1.2e-76 | 258.3 | Protein kinase domain |
XP_057772538.1 |
Pfam | PF07714 |
PK_Tyr_Ser-Thr | Domain | 13 | 262 | 1e-41 | 143.7 | Protein tyrosine and serine/threonine kinase |
XP_057772538.1 |
Pfam | PF03822 |
NAF | Domain | 297 | 354 | 1.5e-17 | 64.2 | NAF domain |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。