当前解析结果
SmilChr07G000957| 统一新 Gene ID | SmilChr07G000957 |
|---|---|
| 名称 | SmilChr07G000957 |
| 描述 | protein ASPARTIC PROTEASE IN GUARD CELL 2 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 6894507 - 6896271 / + |
| NCBI Gene ID | LOC130992135 |
|---|---|
| GeneID | 130992135 |
| locus_tag | - |
| NCBI Name | LOC130992135 |
| 原始查询 | SmilChr07G000957 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein ASPARTIC PROTEASE IN GUARD CELL 2 |
| 产物 | protein ASPARTIC PROTEASE IN GUARD CELL 2 |
| Arabidopsis | AT3G20015 (AT3G20015)Eukaryotic aspartyl protease family protein [Source:NCBI gene (formerly Entrezgene);Acc:821540] identity=68.5; qcov=0.945; evalue=0; confidence=high |
| Rice | Os01g0140100- identity=48.2; qcov=0.905; evalue=8.26e-120; confidence=high |
| GO | GO:0004190 (aspartic-type endopeptidase activity); GO:0006508 (proteolysis) |
| KEGG | - |
| Pfam | PF00026 (Asp); PF14541 (TAXi_C); PF14543 (TAXi_N) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992135 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Secreted | 分泌到胞外 | 0.80000 | XP_057772640.1 |
| 2 | Vacuole | 液泡 | 0.20000 | XP_057772640.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057772640.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057772640.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057772640.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:6894818 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B137 |
Chr7:6894863 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C32 |
Chr7:6894988 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B18,B23,B97,C53,C54 |
Chr7:6895013 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
Chr7:6895379 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B55,B93 |
Chr7:6895418 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A11,C39,C42,C71 |
Chr7:6895420 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C65 |
Chr7:6895424 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B125 |
Chr7:6895469 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B123,C50 |
Chr7:6895592 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C52 |
Chr7:6895679 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:6895746 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057772640.1PF00026
Asp 134-470 aa
PF14543
TAXi_N 135-297 aa
PF14541
TAXi_C 320-470 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057772640.1 |
Pfam | PF00026 |
Asp | Domain | 134 | 470 | 1e-20 | 75.2 | Eukaryotic aspartyl protease |
XP_057772640.1 |
Pfam | PF14543 |
TAXi_N | Domain | 135 | 297 | 3.5e-48 | 164.8 | Xylanase inhibitor N-terminal |
XP_057772640.1 |
Pfam | PF14541 |
TAXi_C | Domain | 320 | 470 | 1.5e-30 | 106.8 | Xylanase inhibitor C-terminal |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。