当前解析结果
SmilChr07G001021| 统一新 Gene ID | SmilChr07G001021 |
|---|---|
| 名称 | SmilChr07G001021 |
| 描述 | uncharacterized SmilChr07G001021 |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 7420753 - 7425421 / - |
| NCBI Gene ID | LOC130992163 |
|---|---|
| GeneID | 130992163 |
| locus_tag | - |
| NCBI Name | LOC130992163 |
| 原始查询 | SmilChr07G001021 |
| 来源 | GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Single hybrid motif superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:841699]; symbol=AT1G52670; hit=AT1G52670; species=arabidopsis; confidence=high |
| 产物 | Single hybrid motif superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:841699]; symbol=AT1G52670; hit=AT1G52670; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G52670 (AT1G52670)Single hybrid motif superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:841699] identity=59.7; qcov=0.728; evalue=7.68e-78; confidence=high |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | PF00364 (Biotin_lipoyl) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992163 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057772681.1 |
| 2 | Chloroplast stroma | 叶绿体基质 | 1.00000 | XP_057772681.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057772681.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057772681.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057772681.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:7421264 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:7422592 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr7:7422799 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A10,A18,B126,B46,C83 |
Chr7:7422876 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C4 |
Chr7:7422897 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B115,B12,B41,C10,C42 |
Chr7:7423121 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B3,C15,C72 |
Chr7:7423766 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr7:7424820 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B53,C62 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057772681.1PF00364
Biotin_lipoyl 210-264 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057772681.1 |
Pfam | PF00364 |
Biotin_lipoyl | Domain | 210 | 264 | 2e-08 | 34.7 | Biotin-requiring enzyme |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。