当前解析结果
SmilChr07G001027| 统一新 Gene ID | SmilChr07G001027 |
|---|---|
| 名称 | SmilChr07G001027 |
| 描述 | cytochrome P450 734A1-like |
| 染色体 / SeqID | Chr07 / NC_080393.1 |
| 坐标与链方向 | 7461641 - 7465937 / - |
| NCBI Gene ID | LOC130992131 |
|---|---|
| GeneID | 130992131 |
| locus_tag | - |
| NCBI Name | LOC130992131 |
| 原始查询 | SmilChr07G001027 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | cytochrome P450 734A1-like |
| 产物 | cytochrome P450 734A1-like |
| Arabidopsis | AT2G26710 (BAS1)Cytochrome P450 superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:817212] identity=55.5; qcov=0.983; evalue=0; confidence=high |
| Rice | Os02g0204700 (OsCYP734A2)- identity=48.4; qcov=0.966; evalue=0; confidence=high |
| GO | GO:0004497 (monooxygenase activity); GO:0005506 (iron ion binding); GO:0010268 (brassinosteroid homeostasis); GO:0016131 (brassinosteroid metabolic process); GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen); GO:0020037 (heme binding) |
| KEGG | smil00905 (Brassinosteroid biosynthesis - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00067 (p450) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:130992131 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057772634.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.80000 | XP_057772634.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057772634.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057772634.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057772634.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr7:7461941 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B103,B51,B93,C86,C87 |
Chr7:7462059 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A21,B124,B128,B29,C15 |
Chr7:7462159 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C42,C77 |
Chr7:7462599 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B53,C22 |
Chr7:7462609 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B15 |
Chr7:7462641 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B136,B137,C20,C3 |
Chr7:7462789 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr7:7462869 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B97,C14,C32,C68,C8 |
Chr7:7463823 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A21,B101,B13,C14,C73 |
Chr7:7464776 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A2,B131,B14,B56,B96 |
Chr7:7464847 |
C |
CT |
1bp_insertion | frameshift_variant | 1 | D10 |
Chr7:7464847 |
C |
CT |
1bp_insertion | CDS_variant | 1 | D10 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057772634.1PF00067
p450 85-505 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057772634.1 |
Pfam | PF00067 |
p450 | Domain | 85 | 505 | 1.1e-86 | 292.2 | Cytochrome P450 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。